Lysinibacillus sp. YS11: LBYS11_20600
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Entry
LBYS11_20600 CDS
T05299
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
lys
Lysinibacillus sp. YS11
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lys03021
]
LBYS11_20600
Transcription machinery [BR:
lys03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LBYS11_20600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF134
HTH_37
Sigma70_ECF
HTH_28
DUF1492
HTH_3
GerE
KORA
HTH_50
NirdL-like_HTH
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
AUS88528
LinkDB
All DBs
Position
complement(4111661..4112446)
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AA seq
261 aa
AA seq
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MSKESLHKSSSKEDVLKWIELYQSTEDDEAQTNLVIHYRYLVESIARKYSNGKSYYDDIV
QVGMLGLLGAIRRFDPNVGRSFEAFAVPTIVGEIKRFLRDKTWDVHVPRRIKELGPRIKS
TVEALTIELQRSPSIKDIAERLEVAEEEVLEAMEMSRSYQALSMDHSIESDSDGSTVTLF
DILGREDDGYEMTNKRMIVSEALVVLNEREKQIIQLTYLEQLSQKEAGERLGISQMHVSR
IQRKAIKKLQEAILASGSVSL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagaatcactacataaatcttcatctaaagaagatgtacttaagtggattgaa
ttgtaccagtcaacggaggatgatgaagcacaaaccaatttagtgattcattatcgatat
ctagttgaatctatagctcgtaaatattcgaatggtaaatcatattatgatgatattgtt
caagtagggatgctgggattgttaggtgcaataagacgttttgatccgaatgttggtcgt
agttttgaagcttttgccgtgccaacaattgttggggaaatcaaacgttttttacgtgat
aaaacatgggatgtgcatgtacctagacgtataaaggaacttgggccgaggattaaatca
actgtggaggcgctgacaattgaattacagcgttctccatccattaaagatattgctgaa
cgattagaagtagcagaggaagaggtactagaagctatggaaatgagccgtagttatcaa
gctctttctatggaccattcgatagagtcagactcagacggtagtacagtcacgttattc
gatattttgggcagggaagacgatggctatgaaatgaccaataaacgaatgattgtttca
gaggcgctggttgtgttgaatgagagggaaaaacaaattattcagcttacatatctagag
caacttagtcaaaaagaagctggagaacgattagggatttctcaaatgcatgtatcgagg
atacaaaggaaagcaataaagaaattacaagaggctattctagcaagtggcagtgtttcg
ctctaa
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