Lysinibacillus sp. YS11: LBYS11_22040
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Entry
LBYS11_22040 CDS
T05299
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lys
Lysinibacillus sp. YS11
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lys03016
]
LBYS11_22040
Enzymes [BR:
lys01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LBYS11_22040
Transfer RNA biogenesis [BR:
lys03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LBYS11_22040
Prokaryotic type
LBYS11_22040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AUS88784
LinkDB
All DBs
Position
complement(4398062..4398802)
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AA seq
246 aa
AA seq
DB search
MRRLKVIISYDGTLFSGYQVQPGERTVQAELERVLAIMHKGEQVKVTASGRTDAKVHATG
QTLHFDTPLAIPAEKYSKALNVQLPRDIRVLSVEEVAHDFHARYDVAGKRYRYIWSCEPI
QSPFRRYYTVETNGVKPNVEAMQEAAKAIIGTHDFSCFCAANTSVKDKVRTVTLLQFEWH
GEELHMVIEGNGFLYNMVRIIAGTLWEVGIGRRKIDNVSYVVASGNRDKAGKTAPPQGLY
LEKVFY
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgattaaaagtaattataagctatgatggcacacttttttcgggctatcaggta
cagccaggtgaacgcacagtgcaggctgagcttgagcgtgttctagctattatgcataag
ggagaacaggttaaggtaactgcaagtggtcgtacagatgctaaagtacatgcgacaggg
caaacattgcatttcgacacaccacttgccattccagcagaaaaatatagtaaggctttg
aatgtgcaactgccaagagatattcgtgtattatcggttgaggaagtggcacatgacttt
catgcgcgttacgatgtggctggaaaaagatatcgctatatttggtcttgtgagcctatc
caaagtccattccgcagatattatactgtggagacaaatggggtcaaacctaacgtagag
gcgatgcaagaggcagctaaggctattattggtacacatgacttttcttgtttttgcgcg
gcgaatacaagcgtgaaagataaagtacgcacagtaacattgttacaatttgaatggcat
ggtgaagagctacatatggtgattgaagggaatggcttcttatataatatggtacgtatt
attgcaggtactctttgggaggttgggataggtcgacgtaagattgacaatgtgtcctat
gtagttgcttcaggtaatcgtgataaggcaggaaaaaccgctccaccacaagggctatac
ttagaaaaagtgttctattag
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