Lysinibacillus sp. YS11: LBYS11_22065
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Entry
LBYS11_22065 CDS
T05299
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBYS11_22065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lys03021
]
LBYS11_22065
03400 DNA repair and recombination proteins [BR:
lys03400
]
LBYS11_22065
Enzymes [BR:
lys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LBYS11_22065
Transcription machinery [BR:
lys03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LBYS11_22065
DNA repair and recombination proteins [BR:
lys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LBYS11_22065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Dockerin_1
HHH_5
PASTA
DUF961
Motif
Other DBs
NCBI-ProteinID:
AUS88789
LinkDB
All DBs
Position
complement(4402167..4403111)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISEDSKYGKFVVEPLERGYGNTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTVEGVVEDVASIILNVKKLALKIYSDEEKVIEIDVKGDGTVTAADITHDSDVEI
LNPDLYIATIAKNGHLRMRMYAQRGRGYTPADQNKREDLPIGVIPIDSIYTPVSRVNFQV
ENTRVGQSSDYDKLSLDVWTDGSIGPKEAISLGAKILTEHLNIFVGMTDEAQTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVLELANKSEDDMMKVRNLGRKSLEEVK
AKLEELGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaaaccaaagattgaaacggtggagatcagcgaagattccaaatat
ggaaagtttgttgtagaaccgcttgaacgcggatatggaaacactttgggtaattcttta
cgtcgtatccttctgtcttcattaccaggagctgctgtcacttcaattcaaattgatggt
gttcttcacgaattctcaactgtagaaggcgtagtagaagatgtagcttcaatcattttg
aacgtgaaaaaactagctcttaaaatctactctgacgaagaaaaagttattgagattgat
gttaaaggcgatggtacagttacggctgctgacattacacatgacagtgacgtagaaatt
ttaaacccagatctatatattgcaacaatcgctaaaaacggtcatttacgtatgcgtatg
tatgcacaacgcggccgtggttacactcctgctgatcaaaacaaacgtgaggatcttcct
atcggcgtgatcccgatcgactctatttacactccagtatcacgcgtcaatttccaagtg
gaaaatactcgtgttggtcagtcttctgactacgacaaactttctcttgatgtgtggaca
gatggcagcatcggtccgaaagaggcgatttcgctcggagcaaaaattttaaccgagcat
cttaacatcttcgttggcatgacagatgaggcacaaactgctgaaatcatggtcgaaaaa
gaagaagatcaaaaagaaaaagttttagagatgactatcgaagagcttgatctttctgtt
cgttcttataactgtttaaaacgcgctggtattaatacagtactagaacttgcgaataaa
tcggaagacgacatgatgaaagttcgtaaccttggacgcaagtcattagaagaagtaaaa
gcgaagttagaagagcttggtttaggattacgcaaagaagactaa
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