Lysinibacillus sp. YS11: LBYS11_22360
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Entry
LBYS11_22360 CDS
T05299
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lys
Lysinibacillus sp. YS11
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lys03400
]
LBYS11_22360
DNA repair and recombination proteins [BR:
lys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LBYS11_22360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
ABC_tran
AAA_16
RecA
nSTAND3
NTPase_1
KdpD
ATPase_2
AAA_5
SLFN-g3_helicase
AAA_24
AAA_14
GvpD_P-loop
MCM
DUF7125
AAA_30
MeaB
KTI12
DAP3
CbiA
AAA_29
NPHP3_N
AAA
AAA_31
CbiK
NACHT
ArsA_ATPase
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
AUS88846
LinkDB
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Position
complement(4449439..4450815)
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AA seq
458 aa
AA seq
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MAKKKTKFVCSGCGYESAKWMGRCPGCGEWNKMVEEVEMVAKGPRGAFQHSATVTQKAIP
IIQVEATEESRVATEMGELNRVLGGGIVPGSLVLIGGDPGIGKSTLLLQVSALLSNKGHR
VLYISGEESIRQTKLRAERLGVISQELYIYSETNLEFLNQTIDEVQPKFVIVDSIQTVFH
PEVTSAPGSVSQVRECTAELMRIAKTKGIAIFLVGHVTKEGQIAGPRILEHMVDTVLYFE
GERHHNHRILRSQKNRFGSTNEIAIFEMLQGGLKEVLNPSELFLQERSQGAAGSTIVASM
EGTRPILVEIQSLVTPTSFNYPKRMATGVDQNRVQLLMAVLEKRMGFMLQAQDAYIKVAG
GVKLDEPAIDLAVLTSIVSSFKDQAVRATDCFIGEVGLTGEVRRVSRIEQRVIEAAKLGF
KRAFIPSSNIGGWEFPQGIEIVGVETIKDALNACFREL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaagaaaaaaacgaaatttgtatgttcaggctgtggctatgaatctgctaaatgg
atgggaagatgccctggatgtggagaatggaataagatggtggaagaagtagaaatggtt
gcaaaaggcccacgtggagcatttcaacattctgctacagttactcaaaaggcaatcccg
attatccaagtagaagctactgaagaatcgcgcgtagcaacagaaatgggcgaactcaat
cgtgtattaggcggtggcattgtacctggttctctagtattaattgggggcgatcctgga
atagggaaatcaacattactattacaggtttccgcattactctcgaataaagggcatcgc
gtactttatatttccggagaggaatccattcgtcaaacgaaattacgagcagagcgttta
ggagtgatttctcaagagctttacatatactccgaaacaaacctagagtttttaaaccaa
accattgatgaagtacaacctaaatttgtcattgtcgattccatacaaacggtttttcat
ccagaagtaaccagcgccccaggtagtgtctcacaggttcgtgaatgtacagccgagctg
atgcgaatcgctaaaacaaaaggcattgctatttttctagtagggcatgtcacaaaagag
gggcaaattgctgggccacgtattttagagcatatggtggatactgtactatactttgaa
ggggaaagacatcataatcatcgtattttacgaagccaaaaaaaccgcttcggatctaca
aatgaaattgctatatttgaaatgcttcaaggtgggttaaaggaagttctaaacccttct
gagttatttttacaggagcgttcacaaggtgcggcggggtcaactattgtagcctcaatg
gaggggacaaggccaattcttgttgaaattcaatccttagttacacctacaagctttaac
tatcctaaacgtatggccacaggtgtcgatcaaaatcgagtacaattgctaatggctgta
ctagaaaagcgtatgggtttcatgctacaagctcaggatgcatatattaaagttgctggt
ggtgtcaagctggatgagccagcaatagatttagcggtgttgacaagcattgtatctagt
tttaaggatcaggcagtgcgtgcaacggattgctttattggtgaggtcggactgacaggt
gaggtccgtcgggtatcacgtatagaacagcgagtcattgaagcggcgaagcttggattt
aaaagagctttcattccttcttcgaatattggtggttgggaatttccgcagggaattgaa
attgttggtgtagaaacaataaaagatgcactaaatgcatgctttagagagttataa
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