Lysinibacillus sp. YS11: LBYS11_22435
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Entry
LBYS11_22435 CDS
T05299
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase RluF
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
lys
Lysinibacillus sp. YS11
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lys03009
]
LBYS11_22435
Enzymes [BR:
lys01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
LBYS11_22435
Ribosome biogenesis [BR:
lys03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LBYS11_22435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TruB_N
Motif
Other DBs
NCBI-ProteinID:
AUS88861
LinkDB
All DBs
Position
4465307..4466008
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AA seq
233 aa
AA seq
DB search
MRINKYLSETGIISRRGADKWIAEGKVTINGELATVGSQVETGDVVCVDGKEVKKEQQLV
YIALNKPVGITSTTERHIKGNVVDFVNHPLRIFHIGRLDKESEGLLLLTNDGDIVNKILR
AENHHEKEYIVQVDKPITAQFIQKMGAGVDILDTTTLPCHVEKISDKVFKIILEQGLNRQ
IRRMCSALGYSVKRLQRIRIMNIKLGNLKVGQWRDLTEKERTELFKLLNYTPK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattaataaatatttaagtgaaacaggcatcatatctcgtcgtggcgctgataaa
tggatagcagaaggaaaggtaacaattaacggagaactggcaacggttggtagtcaagtt
gaaacaggagacgttgtttgcgtggatggaaaagaggtaaagaaagaacaacagcttgtt
tacattgctctaaataaacctgtcggcattacaagtacgacagagcgtcatataaaaggc
aatgttgttgattttgtcaatcatcctctacgtatttttcatatcgggcgtcttgataag
gaatcagaggggctattattattaacgaatgatggtgatatcgtcaataaaattctacgt
gctgaaaatcatcatgaaaaagaatacattgttcaagttgataagcctataactgcgcaa
ttcatccaaaaaatgggtgcaggtgtcgatattttagatacaacaaccttaccatgccat
gtggaaaagatttcagataaagtatttaaaatcattttagagcaaggcttaaaccgccaa
attcgtcgaatgtgctcagcactagggtattccgttaagcgtctacaacgcattcgtatt
atgaatattaagcttggtaatttaaaggtagggcaatggcgtgatttaactgagaaggaa
cgaacagaactattcaaactactcaattacacaccaaaatag
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