Lysobacter sp. TY2-98: DWG18_01085
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Entry
DWG18_01085 CDS
T05586
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DWG18_01085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyt03400
]
DWG18_01085
Enzymes [BR:
lyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DWG18_01085
DNA repair and recombination proteins [BR:
lyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DWG18_01085
RecFOR pathway proteins
DWG18_01085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_18
AAA_3
AAA_16
AAA_22
Rad17
Mg_chelatase
nSTAND3
AAA_14
TIP49
NB-ARC
AAA_2
NTPase_1
RNA_helicase
DUF815
AAA_17
Bac_DnaA
TsaE
AAA_24
AAA_33
AAA_28
Sigma54_activ_2
ABC_tran
DUF87
NPHP3_N
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AXK71017
UniProt:
A0A345ZGZ2
LinkDB
All DBs
Position
223884..224918
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AA seq
344 aa
AA seq
DB search
MTDTRLIAAGATSEDAVAEASIRPKRLDEYLGQVPVREQMKIYIEAAKGRGEALDHVLIF
GPPGLGKTTLSQVIANELGVNLRQTSGPVIEKAGDLAALLTNLQPHDVLFVDEIHRLSPL
VEEVLYPAMEDFQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRL
EFYSAEELTKIVQRSAQILGIACTPDGAAEIARRSRGTPRIANRLLRRVRDFAQVRGDGT
ISRDTAFDSMSMLKVDPEGFDELDRRLLGIIIESFDGGPVGVESLAAALSEERGTLEDVV
EPYLIQQGYVIRTARGRMATPKAYRHLGFTPRAKANDLFEPPAV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacccgcctcatcgccgccggcgccacgtccgaagacgccgtcgccgaagcc
tcgatccgccccaagcgcctggacgagtatctcggccaggtgccggtgcgcgagcagatg
aagatctacatcgaggcggccaagggtcgtggcgaggcgctcgaccatgtgctgatcttc
gggcctcccggtctcggcaagaccacgctgagccaggtcatcgcgaacgaactcggcgtc
aacctgcgacagacgtcgggcccggtgatcgagaaggcgggcgacctcgccgcgctgctc
accaacctgcagccgcacgacgtgctgttcgtcgacgagatccaccgtctttcgccgctg
gtcgaggaagtgctctatccggcgatggaggatttccagctcgacatcatgatcggcgaa
ggccccgcggcgcgctcgatcaagatcgacctgccgccgttcactctgatcggcgcgacc
acgcgcgcgggcctgctgaccgcgccgctgcgcgaccgcttcggcatcgtgcagcgcctg
gagttctacagcgcggaggagctgaccaagatcgtgcagcgctcggcgcagatcctcggc
atcgcctgcacgccggacggcgcggctgaaatcgcacgccgctcgcgcggtacgccgcgt
atcgcgaaccgcctgctgcgccgtgtgcgcgatttcgcgcaggtgcgcggcgacggcacg
atcagccgcgacaccgcgttcgattcgatgtcgatgctgaaggtcgatccggaaggtttc
gacgaactcgaccgtcgcctgctcggcatcatcatcgaatcgttcgatggcgggccggtg
ggcgtggaatcgctggccgcggcgctcagcgaagaacgcggcacgctcgaggacgtggtc
gagccgtacctgatccagcagggctacgtgatacgcaccgcgcggggtcgcatggcgaca
ccgaaggcgtaccggcacctcggattcacgccgcgcgcgaaggcgaatgatctgttcgag
ccgcccgcggtctga
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