Lysobacter sp. TY2-98: DWG18_01395
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Entry
DWG18_01395 CDS
T05586
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DWG18_01395 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyt03019
]
DWG18_01395 (recQ)
03400 DNA repair and recombination proteins [BR:
lyt03400
]
DWG18_01395 (recQ)
Enzymes [BR:
lyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DWG18_01395 (recQ)
Messenger RNA biogenesis [BR:
lyt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DWG18_01395 (recQ)
DNA repair and recombination proteins [BR:
lyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DWG18_01395 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AXK73496
UniProt:
A0A345ZP21
LinkDB
All DBs
Position
complement(280242..282053)
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AA seq
603 aa
AA seq
DB search
MPDTALDLLHRIFGHTAFRGEQAHIVDHVAQGGDALVLMPTGGGKSICYQIPALLRDGVA
IVVSPLIALMQDQVEALRQVGVRAAYLNSTLDAETAAMIERQLLQGELDLLYVAPERLLT
GRFLSLLDRAQLGLFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPDVPRIALTATADAPT
RREIVERLALEDAKQFVSSFDRPNIRYTVVPKDGGGTRQLLDFLARHPGQSGIVYAFSRK
RVESVAEQLCKAGMKALAYHAGMDASIRAANQRRFLQEDGIVMVATIAFGMGIDKPDVRF
VAHVDLPKSVEGYYQETGRAGRDGGASEAWLSYGLGDVVSLRQMVEQGEAGEERKRLELR
KLDALLGYCESTDCRRQALLRWFGEERAGGCGNCDNCLSPPESWDGTEASRKALSAIYRT
GQRFGVGHLVDVLRGVRTDKVAQFRHDVLSVFGVGKDLDDRQWRSVFRQLMAGGFVDVDV
EHFGALRLTEAARPLLRGETTVRFRTEPKAAVRSRRDRRTSEAEAFDLDPASLARFQALR
EWRAQTAREQNVPAYVIFHDATLRAIAEGDPADLDELARIPGIGSSKLDRYGEAVLQQLF
DAA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaccgccctcgacctcctccaccgcatcttcggccacacggccttccgcggt
gagcaggcgcacatcgtcgaccacgtcgcccagggcggcgacgcactcgtgctgatgccc
accggcggcggcaagtcgatctgctaccagatccccgcgcttctgcgcgacggcgtggcg
atcgtggtctcgccgctgatcgcgctgatgcaggaccaggtggaggcgctgcgccaggtc
ggcgtgcgcgccgcgtatctcaattcgacgctcgacgccgagaccgcagcgatgatcgag
cgccagctgctgcagggggaactcgatcttctgtacgtcgcgccggagcgcctgctcacc
gggcgcttcctgtcgctgctcgatcgcgcgcaactcgggctgttcgccatcgacgaggcg
cactgcgtctcgcagtggggccacgacttccgccccgaatatcgccagctcacggtgctg
cacgagcgctggcccgacgtgccgcgcatcgcgctcaccgcgacggccgatgcaccgacg
cggcgcgagatcgtcgaacgcctcgcactcgaggacgcgaagcagttcgtcagttcgttc
gatcggcccaacatccgctacaccgtcgtgcccaaggacggcggcggcacgcgccagttg
ctggacttcctcgcgcggcatccgggccagagcggcatcgtctacgcgttctcgcgcaag
cgtgtcgaatcggtggcggaacagctgtgcaaggccggcatgaaggcgctggcgtaccac
gccggcatggacgcttccatccgcgcggccaaccagcgtcgtttcctgcaggaagacggc
atcgtgatggtcgcgaccatcgcattcggcatgggcatcgacaaacccgacgtgcgcttc
gtcgcgcatgtcgatctgccgaagtcggttgaaggttattaccaggagactggccgcgcg
ggccgcgacggcggcgcgtcggaggcgtggttgagctacgggctcggcgacgtcgtcagc
ctgcggcagatggtcgaacagggcgaggcgggcgaagagcgcaagcgcctcgagctgcgc
aagctcgacgcattgctcggctactgcgaaagcaccgactgccgacgccaggcgctgctg
cgctggttcggggaagagcgcgcgggcggctgcggcaattgcgataactgcctgtcgcca
cccgagagctgggacggcacggaagcctcgcgcaaggcgctgtcggcgatctaccgcacc
gggcagcgcttcggcgtcggtcatctcgtcgatgtcttgcgtggagtccgtaccgacaag
gtcgcgcagttccgccacgacgtgttgagcgtgttcggtgtcggcaaggaccttgatgac
cgccagtggcgcagcgtgttccgccagctgatggcgggcgggttcgtcgatgtggacgtc
gagcatttcggcgcgctgcgcctgaccgaagctgcgcgtccgctgctccgcggcgagacg
acggtgcgctttcgcaccgaaccgaaggcggcggtgcgttcgcgtcgcgatcgccgcacc
tccgaagcggaagcattcgacctggatcccgcatcgctggcgcgtttccaggcgctgcgc
gaatggcgcgcgcagaccgcgcgagagcagaacgtgccggcctacgtgatcttccacgac
gccacgttgcgcgcgatcgccgagggcgaccccgccgatctcgacgaactcgcacgcatc
ccgggcatcggcagcagcaagctcgaccgctacggcgaggcggtgctgcagcagctgttc
gacgcggcctga
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