Lysobacter sp. TY2-98: DWG18_01885
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Entry
DWG18_01885 CDS
T05586
Name
(GenBank) rRNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
lyt
Lysobacter sp. TY2-98
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lyt03009
]
DWG18_01885
03016 Transfer RNA biogenesis [BR:
lyt03016
]
DWG18_01885
Ribosome biogenesis [BR:
lyt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DWG18_01885
Transfer RNA biogenesis [BR:
lyt03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
DWG18_01885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
SDA1_HEAT
Motif
Other DBs
NCBI-ProteinID:
AXK71158
UniProt:
A0A345ZHD3
LinkDB
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Position
398114..398917
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AA seq
267 aa
AA seq
DB search
MNRPYPPHGRPPRDDAPERAVRDEVRLYGLNAVRAVFARRPEAIRKVYLAEARIPALQPL
LKWCVANRVGYRVVDDIDLQKLAASSHHEGVVADVLRDAPMPLSTWLRDLPAGPQCALWL
DGVGNPHNLGAILRSAAHFGIAALLIPKESTLSLSGAAARVAEGGAESVPMVRLGRADNS
LAQLRGAGFRLAATLVHGGDDLFVAPLPERLVYVMGAEGEGMDRDFAAACDLRVSIPGSG
AVESLNVASATAVLLAEWRRRVGRSAL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaccgtatcccccgcatgggcgaccgcctcgcgacgacgcgcccgagcgcgcg
gtgcgcgacgaggtgcggctgtacgggctcaatgcagtgcgcgcggtattcgcgcggcgg
ccggaggcgatccgcaaggtctacctcgccgaagcgcgcattccggcgttgcagccgctg
ctgaagtggtgcgtggcgaatcgcgtcggctatcgcgtggtcgacgacatcgacctacag
aagctcgccgcgagttcacaccacgaaggcgtcgtcgctgacgtgctgcgcgatgcgccg
atgccgctgtcgacctggctgcgcgatctgccggcgggtccgcagtgcgcgctgtggctg
gacggcgtcggcaatccgcacaacctcggtgcgatcctgcgttcggccgcgcatttcggc
attgccgcgctgctcattccgaaggagtcgacgctgtcgctgtccggcgccgccgctcgg
gtggcggagggcggggcggagtcggtgccgatggtgcgcttgggtcgcgccgacaattcg
ctcgcgcagctgcgaggcgcaggtttccgccttgccgcgacgctggtgcacggtggcgac
gacctatttgtcgcgccgttgcccgagcgcctggtgtatgtgatgggcgccgaaggcgag
ggcatggatcgcgatttcgcggccgcatgcgacctgcgcgtgtcgattccgggcagtggc
gcggtcgaaagcctcaacgtcgccagcgcgacggcggtgctgctcgccgaatggcggcgt
cgcgtcgggcgttcagccctgtaa
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