Lysobacter sp. TY2-98: DWG18_03585
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Entry
DWG18_03585 CDS
T05586
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
lyt
Lysobacter sp. TY2-98
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lyt03016
]
DWG18_03585
Enzymes [BR:
lyt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
DWG18_03585
Transfer RNA biogenesis [BR:
lyt03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
DWG18_03585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AXK71462
UniProt:
A0A345ZI87
LinkDB
All DBs
Position
complement(739994..741394)
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AA seq
466 aa
AA seq
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MTDLALPVADPTTSPAATPRGKLFIETHGCQMNEYDSAKMADVLAVAEGLEITHDPAEAD
VILVNTCSIREKAQEKVFSQLGRWRSLKQGGKPVLIGVGGCVASQEGEAIVKRAPFVDLV
FGPQTLHRLPELIEARRESGKPQVDISFPEIEKFDRLPEPRADGPSAFVSIMEGCSKYCS
FCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGPMGEGEIADLGLLI
RTIAQIDGVDRIRFTTSHPLEFSDSLVEAYRDVPQLANYLHLPVQSGSDRILAAMKRGYT
ALEFKQKIRKLRAVRPDISISSDFIVGFPGETDADFEKTMKLIEDVGFDQSFSFIYSRRP
GTPASNLEDDVSSETKHARLSRLQATINANAARISQSMVGSVQRILVEGPSRKDPNELTG
KTENMRSVNFAAPKRLVGQFVDVVITEALSNSLRGRVVTQDEAVPA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctcgcgctccccgtcgccgacccgacgacgtcccctgccgccaccccacgc
ggcaagctcttcatcgaaacccacggttgccagatgaacgagtacgactcggcgaagatg
gccgacgttctcgccgtcgccgagggtctggaaatcacccatgacccggccgaagccgac
gtcatcctggtcaacacctgctcgatccgcgagaaggcccaggaaaaggtcttcagccag
ctcggccgctggcgctcgctcaagcagggcggcaagccggtcctgatcggcgtcggtggc
tgcgtggcgagccaggagggcgaggcgatcgtgaagcgcgccccattcgtcgatctggtg
ttcggcccccagacgctgcaccgcctgccggagctgatcgaggcccgccgcgagtcgggc
aagccgcaggtcgacatttcctttccggagatcgagaagttcgaccgcctgcccgagccg
cgcgcggacgggccgagcgcgttcgtctcgatcatggaaggctgctcgaagtactgctcg
ttctgcgtagtgccctacacgcgcggcgaggaagtcagccgtccgttcgaggatgtgctg
gtcgaagtcgcgcagctggccgcacagggcgttcgcgagatcaacctgctgggccagaac
gtcaacgcgtatcgcggaccgatgggtgaaggcgagatcgccgacctcggcctcctgatc
cgcacgatcgcccagatcgacggcgtcgaccgcatccgtttcaccacgtcccaccctctc
gagttctccgactcgctggtcgaggcctatcgcgacgtgccgcagctcgcgaactacctg
cacctgcctgtgcagtcgggttccgaccgcatcctcgccgcgatgaagcgtggctacacc
gcgctcgaattcaagcagaagatccgcaagctgcgtgcggtgcggcccgacatctcgatc
tcgtcggacttcatcgtcggctttcccggggagaccgatgcggatttcgagaagacgatg
aagctgatcgaggacgtcggcttcgaccagtcgttctccttcatctactcgcgtcgtccg
ggcacaccggcatcgaatctcgaggacgatgtatcgagtgagaccaagcatgcgcgcctg
tcgcgtttgcaggcgacgatcaacgcgaacgcggcgcgcatctcgcagtcgatggtcggc
agcgtgcagcgcatcctcgtcgaagggccgtcgcgcaaggatccgaacgaattgacgggc
aagaccgagaacatgcgttcggtgaactttgcggcgccgaagcgcctggtcggtcagttc
gtcgacgtcgtgatcaccgaggcgctgtcgaattcgcttcgcggccgcgtggtgacgcag
gacgaggcggttccggcgtaa
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