Lysobacter sp. TY2-98: DWG18_04195
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Entry
DWG18_04195 CDS
T05586
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt03030
DNA replication
lyt03430
Mismatch repair
lyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DWG18_04195
03430 Mismatch repair
DWG18_04195
03440 Homologous recombination
DWG18_04195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyt03032
]
DWG18_04195
03400 DNA repair and recombination proteins [BR:
lyt03400
]
DWG18_04195
Enzymes [BR:
lyt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DWG18_04195
DNA replication proteins [BR:
lyt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DWG18_04195
DNA repair and recombination proteins [BR:
lyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DWG18_04195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AXK71568
UniProt:
A0A345ZIJ3
LinkDB
All DBs
Position
complement(865594..869112)
Genome browser
AA seq
1172 aa
AA seq
DB search
MTSRFVHLHLHSEYSLADSTIRIGELIKRCVALGQPAVAITDINNVFAAVKFYKAAEAAG
IKPIIGADVALADGNESPSRMTLLCRDRQGYLTLSRLLTRMWMEGHRADGVAMRPDWLRE
DNGSLFAIAGRDSLAAQLAGGGRHDLAEAWLVDWKDVLGDRLHLELTRTGRKGEDAFNAF
ALHASSLREIPVIATNDVRFVDEAGYEAHEARVCIATGRVLDDPKRPRDYSPQQFLRSGE
EMDDLFADVPDAIANAHALAMRCNVEMKLGEYALPAFPVPSEHTIESWLRNTARDGLAKR
LEKVPPSDGRTTNEYTSRLETELDVIIKMGFPGYFLIVADFINWGKQQGIPVGPGRGSGA
GSLVAWALGITDLDPLPYDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGRDR
VSQIITYGTMAAKAAVRDCGRVLGHPYGMVDGIAKLIPNTLGIGLEDALGQSDASKKDPE
LASQELITRYRAEDDVRDLMDLALSLEDLTRNAGKHAGGVVIAPSPLSDFCPLFAEHDEG
GRGRNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINKRRAKEGGEPLDITTLPL
DDAKAYEVFARGDTVAVFQFESRGMRELLKRAQPDRFDDLIALVSLYRPGPMDLIPDFIE
RKHGRQDVVFPHPLLEPVLAPTYGVVVYQEQVMQTAQILGGYSLGGADLLRRAMGKKKPE
EMAKERVKFEAGAKEHHGIEPRVSGPIFDLLEKFAGYGFNKSHAAAYALVSYQTAWLKAH
YPAEFMAAVLSSDMDNTDKVTGFLDEARAIGMTVLPPDVNESAYMFEARTPDTIRYGLGA
VKGVGRGVCEAIVEARRAGPFTDLLDLCQRADDGKLNRRALEAMAQAGALDAIGKNRASL
FLQIPEVLRATDQLAKETAAGQVSLFGGFDTAAPALHLDLPECDEWPVGKLLEHERETLG
HYLSGHPFDPHREDVHALIGFDLGDLERIWAGRPDSGRGGWRPEMETTVAGLVVGFRKKG
DSQVFVQIEDGKGRLECAFFAETYAEHASLIGRDKLLVVQGGLREDAFSGGFALKAQRCW
DFAQVCGRHAQRLSVRLDLRQPGTMARVEAVLAAHRPGPTPLRLHLLLDGTHGMVDLDGA
QGVRLSPDLMEALRATPGVVTVKASLSKPWAH
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccgcttcgttcacctccatctccacagcgaatactcgctcgccgactcgacg
atccgtatcggcgagttgatcaagcgatgcgtggcgttgggccaaccggcggtggcgatc
accgacatcaacaacgtcttcgccgccgtgaagttctacaaggcggcggaagcggcgggc
atcaagcccatcatcggcgccgacgtcgcgctcgccgacggcaacgagtccccctcgcgc
atgacgctgctctgccgcgaccgccagggctacctcacgctgtcgcgcctgctcacgcgc
atgtggatggaaggccatcgcgccgatggcgtcgccatgcgtccggactggctgcgcgag
gacaacggcagcctgttcgcgatcgcgggtcgcgacagcctggccgcgcagctcgctggc
ggcggccgccacgatcttgccgaagcctggctggtcgactggaaggacgtgctgggcgac
cggctgcatctcgaactcacgcgcaccggccgcaagggcgaggatgcgttcaacgcgttc
gcgctgcatgcgtcgtcgctgcgcgagattccggtcatcgcgaccaacgacgtccgcttc
gtcgacgaagccggctacgaagcgcacgaggcgcgcgtctgcatcgcgaccggccgcgtg
ctcgacgatcccaagcgtccgcgcgactacagtccgcagcagttcctgcgctccggcgag
gagatggacgatctcttcgccgacgtgcccgacgcgatcgcgaatgcgcatgcgctggcc
atgcgctgcaacgtcgagatgaagctcggcgaatacgcgctccccgcgtttccggtgccg
agcgaacacaccatcgagtcgtggctgcgcaacaccgcgcgcgacggtctggccaagcgt
ctcgagaaggtgccgccgtcggacggccgcaccacgaacgagtacacgtcgcgtctggag
accgagctcgacgtcatcatcaagatggggtttcccggctacttcctgatcgttgcggac
ttcatcaattggggtaagcagcagggcattcccgtcggtccgggtcgtggttccggtgcg
ggttcgctggttgcgtgggcgctcggcatcaccgatctcgatcccctgccctacgacctg
ctgttcgagcggttcctcaatcccgaacgcgtgtcgatgcccgacttcgacatcgacttc
tgcatggatcgccgtgacgaagtcatcgactacgtcgcgcgcaagtacggccgcgaccgc
gtctcgcagatcatcacgtacggcacgatggcggcgaaggcggcagtgcgcgactgcggc
cgcgtgctcggccatccgtacggcatggtcgacggcatcgcgaagctgattccaaacacg
ctcggcatcggtctcgaagacgccctcggtcagtcggatgcatcgaagaaggatcccgag
ctcgcgtcgcaggaactgatcacgcgttaccgcgccgaagacgacgtgcgcgacctgatg
gatctcgcgctctcgctcgaggacctgacgcgcaacgccggcaaacacgccggcggcgtg
gtgatcgcaccgtcgccgttgagcgacttctgcccgctgttcgccgaacacgacgaaggc
ggccgcggccgcaatccggtcacgcagttcgacaaggacgacgtcgaagccgtcggcctg
gtgaagttcgacttcctcggcctgcgcacgctcacgatcatcgattgggcggtgaaggcg
atcaacaagcggcgcgcgaaggaaggcggcgaaccgctggacatcaccacgctgccgctc
gacgacgcgaaggcgtacgaggtgttcgcgcgcggcgataccgtcgcggtgttccagttc
gaatcgcgcggcatgcgcgagttgctcaagcgcgcgcagcccgaccgcttcgacgacctc
atcgcactcgtgtcgctgtaccgcccgggcccgatggacctgatcccggatttcatcgag
cgaaagcacggacgccaggacgtggtcttcccgcatccgctgctcgaaccggtgctcgcg
cccacgtacggcgtcgtcgtctaccaggagcaggtcatgcagaccgcgcagatcctgggc
ggctattcgctgggcggcgcggacctgctgcgtcgcgcgatgggcaagaagaagcccgag
gagatggcgaaggaacgcgtcaagttcgaagccggtgcgaaggaacaccacggcatcgaa
ccgcgtgtgtccgggccgatcttcgacttgctcgagaagttcgcgggctacggtttcaac
aagtcgcacgccgccgcgtatgcgctggtgtcgtaccagacggcatggctgaaggcgcac
tacccggccgagttcatggccgcggtgctgtcgtcggacatggacaacaccgacaaggtg
acgggcttcctcgacgaggcacgcgccatcgggatgacggtgctgccgccggacgtcaac
gaatcggcctacatgttcgaagcacgcacgccggacacgatccgctacggcctcggtgcg
gtgaaaggcgtgggacgcggcgtctgcgaagcgatcgtcgaagcacgccgcgccggtccg
ttcaccgatctgctcgacctctgccagcgtgccgacgacggcaagctcaatcgccgcgcg
ctcgaagcgatggcgcaggccggcgcgctcgatgcgatcggcaagaaccgcgcgagcctg
ttcctccagattcccgaggtgctgcgcgccaccgaccagctggcgaaagaaaccgccgcg
ggacaggtctcgctgttcggcggtttcgataccgccgcgcccgcgctgcatctcgacctg
cccgaatgcgacgagtggccggtcggcaagctgctcgaacacgagcgcgagacgctcggc
cactacctcagcggccatccgttcgatccgcaccgcgaggacgtgcacgcgctgatcggc
ttcgacctcggcgatctcgaacgcatctgggcggggcgccccgacagcggtcgcggcggc
tggcgtccggaaatggagacgaccgtcgcgggcctcgtcgtcggcttccgcaagaagggc
gactcgcaggtcttcgtgcagatcgaggacggcaagggtcgcctggaatgcgcgttcttc
gccgagacctacgccgaacatgcgtcgctgatcgggcgcgacaagctgctcgtcgtgcag
ggcggcctgcgcgaggatgctttctccgggggcttcgcgctcaaggcgcaacgctgctgg
gatttcgcgcaggtctgcggacgccatgcgcagcgtctgtcggtgcgcctcgacttgcgc
cagccgggcacgatggcgcgtgtcgaagcggtgctggccgcgcaccgcccgggccccacg
ccgctgcgcctgcacctgctgctggacggcacgcacggcatggtggacctcgacggcgcg
cagggcgtgcgcctgagccccgacctcatggaggcgttgcgggcgacacccggcgtcgtc
acggtgaaagcctcgctctcgaagccctgggcgcactag
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