Lysobacter sp. TY2-98: DWG18_04325
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Entry
DWG18_04325 CDS
T05586
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt00300
Lysine biosynthesis
lyt01100
Metabolic pathways
lyt01120
Microbial metabolism in diverse environments
lyt01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DWG18_04325 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lyt01002
]
DWG18_04325 (dapE)
Enzymes [BR:
lyt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DWG18_04325 (dapE)
Peptidases and inhibitors [BR:
lyt01002
]
Metallo peptidases
Family M20
DWG18_04325 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AXK71592
UniProt:
A0A345ZIL7
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Position
896298..897431
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AA seq
377 aa
AA seq
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MTDVLDLTRALIEQRSLTPDDAGCQALVAARLGAAGFACESMRFGDVDNLWAVHVGTSDG
PTLVLLGHTDVVPSGPVEEWTSDPFTPEIRGGRLYGRGAADMKGSVAAFVVALERFAREY
AGHRGRVALLLTSDEEGIALDGVRKVADAFRVRGERIDWCITGEPSSTSKLGDLLRVGRR
GSLSATLTVRGIQGHVAYPEKARNPVHEAMPALAELAARHWDDGYETFPPTTLQISNIVA
GTGANNVIPGELQALFNLRYNPHWNAARLQHECEAILARHCSDYTIDWHRSGEPFYTPDG
ELRQVCRDVLTQFAGCAPEESTGGGTSDARFIAPLGAHCVEIGPVNATIHKVDEHVSVAD
LERLPDLYFELMRRLLG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgttctcgatctcacccgtgcgctgatcgagcagcgttcgctgacgcccgac
gatgccggctgccaggcgctggtcgcagcccgccttggggcagccggcttcgcctgcgag
tcgatgcgattcggtgacgtcgacaacctgtgggccgtgcatgtcggcaccagtgacggg
ccgacgctggtgctgctggggcataccgacgtcgtgccgagtggcccggtcgaagagtgg
accagcgatccgttcacgcctgaaatccgcggcggcaggctgtacggccgaggggcggcg
gacatgaagggcagcgtcgcggccttcgtcgtcgcgttggagcgttttgcccgcgaatac
gcaggtcatcgtggacgcgtcgcacttctgctgacgtcggacgaggagggcatcgctctc
gatggcgtgcgcaaggtcgcggatgcgttccgtgtacgtggcgagcgcatcgactggtgc
atcaccggcgaaccctcctcgacatcgaagctgggcgatctgctgcgtgtcggccgacgc
ggcagcctgtccgccacgcttaccgtgcgcggcatccaggggcatgtcgcctacccggaa
aaagcgcgcaatcccgtgcatgaggccatgccggcgcttgcggagctcgcggcgcggcac
tgggacgatggctacgagacgttcccgcccaccaccctgcagatcagcaacatcgtcgcc
ggcacgggcgcgaacaacgtgattccgggcgagctgcaggcgctgttcaacctgcgctac
aacccgcattggaatgcggcgcggctccaacacgagtgcgaagcgatcctcgcgcggcat
tgcagcgattacacgatcgactggcatcgcagcggcgaaccgttctacacgcccgatggc
gagcttcgtcaggtctgccgcgacgtgctcacgcagttcgccggctgcgcgcccgaagag
agcaccggcggtggcacgtccgacgcgcggttcatcgcgccgctgggcgcgcactgcgtc
gagatcgggccggtgaacgcgaccatccacaaggtggatgaacatgtgtcggtggcggat
ctcgaacgcctgccggacctgtacttcgagctgatgcgccgcctgctgggctga
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