Lysobacter sp. TY2-98: DWG18_05105
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Entry
DWG18_05105 CDS
T05586
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DWG18_05105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyt03019
]
DWG18_05105
03009 Ribosome biogenesis [BR:
lyt03009
]
DWG18_05105
Messenger RNA biogenesis [BR:
lyt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DWG18_05105
Ribosome biogenesis [BR:
lyt03009
]
Eukaryotic type
Pre-60S particles
RNases
DWG18_05105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AXK73563
LinkDB
All DBs
Position
1077680..1078252
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AA seq
190 aa
AA seq
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MSDLRTQGQRLIWIDLEMTGLDTDNDSILEIATVVTDAELNILAEGPEFAIAHPVERLEA
MDDWNRNQHRRSGLWDRVVTQGVSMAEAEARTVEFLDQWVAPNSSPMCGNSICQDRRFLH
RLMPRVEKHFHYRNLDVSTIKELARRWAPQVLSGVNKESAHTALSDTRDSIAELRHYRQF
MGPLAGTPQG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctccgcacccagggccagcgtctcatctggatcgatcttgagatgaccggc
ctcgacaccgacaacgattcgatcctcgagatcgccactgtcgtcaccgatgcggagctc
aacatcctcgcggagggcccagagttcgcgatcgcgcatccggtcgagcggctcgaggcg
atggacgactggaatcgcaaccagcatcgccgctcgggtctgtgggatcgcgtagtgacg
caaggtgtgtcgatggcggaggcggaggcgcggacggtcgaattcctcgatcagtgggtc
gcgccgaattcctcgccgatgtgcggcaactcgatctgccaggaccgtcgcttcctgcat
cgcctgatgccgcgtgtggagaagcacttccactaccgcaatctcgacgtcagcacgatc
aaggaactcgcgcgtcgctgggcgccgcaggtgctgtccggtgtgaacaaggaatccgcg
cacacggcgttgagcgatacgcgcgattccattgccgagctgcgccactaccgccagttc
atggggccgttggcgggaacaccgcagggctga
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