Lysobacter sp. TY2-98: DWG18_05230
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Entry
DWG18_05230 CDS
T05586
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lyt
Lysobacter sp. TY2-98
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lyt03009
]
DWG18_05230
Enzymes [BR:
lyt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DWG18_05230
Ribosome biogenesis [BR:
lyt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DWG18_05230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AXK71750
UniProt:
A0A345ZJ25
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All DBs
Position
complement(1103305..1105029)
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AA seq
574 aa
AA seq
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MSEEKGRKLTLRREQTAAPAPRLEERLHKVLAQAGLGSRRALEQRIADGLVKINGEVAQV
GQSVGTGDKIDIDGRQFVATALTEPPRVLMYNKPEGEVTTREDPEGRPTIFEALPPLKGA
RWIAIGRLDINTTGLLLLTTDGELANALMHPSKEVEREYVCRVRAPEGEETVSDAIIERL
AKGVQLDDGPAKFDEIERIGGSESHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRARYG
GIELPRELLRGQSQELPTARVELLRTDLGLEDGTPSALTLQPVIGQRRAGKSTIHLSGER
SQSGYVGGHNAADEGRELRRFDHVREDRGRGRGGPRKPGGLTVTGEMAAKQSHKPFKQRA
DKGPKPLPDGNPAAFRTWYVPDGVDTGPSGHRNPDSRGRKPFGGKPGGARPGAGGPSGGR
PGGGARPGGGGRPGGGGFRDDRPGGGGFRDDRAGGAPYGGGGGRPGGSRDDRAGGGGGPY
GTGGARKPGGPKPGGQRSHPYGHPGNAPSFPSDHANPGAGGYDRPRGPRPQRSGPPGARG
PGGPSGPGGRGPGGRGPGGPRGGGRPGGGRGPRG
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaaaaaggccgcaagttgaccctgcggcgtgaacagacggcggcgcccgcg
ccccgtctcgaggagcgcctgcacaaggtgctcgcgcaggccggactcggctcgcgccgt
gcgctggaacagcgcatcgccgacggtctggtcaagatcaacggtgaagtcgcgcaggtc
ggccagagtgtcggcacaggcgacaagatcgacatagacggccgccagttcgtggcgacc
gcgctgaccgagccgccgcgcgtgctgatgtacaacaagcccgaaggcgaagtgaccacg
cgcgaagatcccgaaggtcgcccgacgatcttcgaagcgctgccgccgctcaagggcgcg
cgctggatcgcgatcggtcgcctcgacatcaatacgaccggccttctgctgctcaccacc
gacggcgagctggcgaatgcgctgatgcatccgtcgaaggaagtcgaacgcgaatacgtc
tgccgcgtgcgcgcaccggagggcgaggaaaccgtgtcggacgcgatcatcgagcgcctc
gcgaagggcgtgcagcttgacgacggcccggcgaagttcgacgagatcgaacgcatcggc
ggtagcgagtcgcatgactggttccgcgtcgtggtgaaggaaggccgtaaccgcgaagtg
cgtcgtctgtgggagtcgcagggctgccaggtcagccgactgaagcgcgcgcgttacggc
ggtatcgaactgccgcgcgaactgctgcgtggccagtcgcaggaacttccgacggcacgc
gtcgaactgctgcgcacggacctcggtctcgaggacggcacgccgtccgcgctgacgctg
cagcccgtcatcggccagcgtcgcgccggcaagtcgaccatccacctctccggcgaacgc
agccagagcggttacgtcggcggtcacaacgcggccgacgaaggccgcgagctgcgtcgc
ttcgatcacgtgcgcgaggatcgcggccgcggccgcggcggcccgcgcaagccgggcggc
ctgaccgtcaccggcgaaatggcggccaagcagtcgcacaagccgttcaagcagcgcgcg
gacaagggccccaagcccctgccggatggcaaccccgccgcgttccgcacctggtacgtg
ccggacggcgtggataccggccccagcggacatcgcaatcccgattcgcgcggtcgcaag
cccttcggcggcaagccgggtggcgcgcgtcctggcgcgggcggcccgtcgggcggacgt
cctggtggtggcgcacggcccggtggtggcggtcgtccaggcggtggcggtttccgtgac
gatcgcccaggcggtggtggcttccgcgacgaccgcgcaggcggcgctccgtacggcggt
ggtggcggtcgtccgggcgggtcgcgcgatgatcgcgcgggcggcggcggtggtccttac
ggcacgggcggcgcgcgcaagccgggcggtccgaagccgggcggccagcgctcccatccg
tacgggcatccgggcaatgcgccgagcttcccctccgaccacgcgaacccgggcgccggc
ggctacgaccgtccgcgcggcccgcgtccgcagcgctcgggtccgcccggtgctcgtggt
cccggcggtccgagcggtccgggcgggcgtggcccaggcggtcgcggtccgggtggcccg
cgtggtggtggtcgcccgggtggcggacgcggcccgcggggctga
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