Lysobacter sp. TY2-98: DWG18_06260
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Entry
DWG18_06260 CDS
T05586
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lyt
Lysobacter sp. TY2-98
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lyt03016
]
DWG18_06260
Enzymes [BR:
lyt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DWG18_06260
Transfer RNA biogenesis [BR:
lyt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DWG18_06260
Prokaryotic type
DWG18_06260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CATSPERE_NTD1
Motif
Other DBs
NCBI-ProteinID:
AXK71927
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All DBs
Position
complement(1340416..1341249)
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AA seq
277 aa
AA seq
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MTEGAATEPAPGESTRYAIGVEYDGTGFSGWQRLSPHGEPEPTPLPTVQATVEAALSFVA
GTSIELVCAGRTDAGVHAACQVAHFDSPVRRDPRGWTLGATSKLPPEVAALWCREVPREF
NARFSARARRYVYRILNRPVRPALQRQILGWERRPLDATAMHRSAQSLLGERDFSAFRTV
HCQAAHPRREMQEITVRRVGEVVEIEVQANAFLHHQVRNIVGSLLMVGRGEKPEGWIAEV
LEGRDRTRAGPTAPSAGLVFLGPRYPAEWQLPPEVTL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaggcgcggccacggagccggccccgggcgagtccacgcgctacgcgatcggt
gtcgaatacgacggtaccggcttcagcggctggcagcggctgtcgccgcacggcgagccc
gagccgaccccgctgcccaccgtgcaggcgactgtcgaggcggcactgtcgttcgtcgct
ggcacgtccatcgagctcgtctgcgcgggacgcaccgacgccggcgtccacgcagcctgc
caggttgcgcatttcgattcgccggttcgccgcgacccacgcggctggacgctgggcgcg
acgtcgaagctcccgcccgaagtcgccgcgctgtggtgccgcgaagtgccgcgcgagttc
aatgcacgcttctcggcgcgtgcgcgtcgctacgtctatcgcatcctcaaccgtcccgtt
cgcccggcgctgcagcgccagatattgggctgggaacggcgaccgcttgacgccaccgcg
atgcaccggtcggcacagtcgctgctcggcgagcgcgatttttcggcatttcgcacggtg
cattgccaagcggcacacccacgacgcgagatgcaggagatcaccgtccgccgggtcggc
gaggtggtcgagatcgaagtgcaggcgaatgcgttcctgcaccatcaggtccgcaacatc
gtcggcagcctgctgatggtcggtcgcggcgagaagcctgaaggctggatcgccgaagtg
ctcgaaggtcgcgatcgcacacgtgccggcccgacggcaccgtcggctggactggttttt
ctgggcccgcgctatcccgcggagtggcagcttccccccgaggtcaccctgtga
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