Lysobacter sp. TY2-98: DWG18_06985
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Entry
DWG18_06985 CDS
T05586
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
lyt
Lysobacter sp. TY2-98
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lyt03016
]
DWG18_06985 (thpR)
Enzymes [BR:
lyt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DWG18_06985 (thpR)
Transfer RNA biogenesis [BR:
lyt03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DWG18_06985 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
AXK72050
UniProt:
A0A345ZJX5
LinkDB
All DBs
Position
complement(1484643..1485197)
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AA seq
184 aa
AA seq
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MTANPNPATTGGGHRLFFALWPTDDVRVALGRATHGVEMFVGAGRRTASEKHHLTLHFLG
GWPAPPDDVIEQACDAAATVRADALRLVIDHAGGFAAARVGWLAPSANAGLEALWASLGR
ALDDAGIRYRSHERFTPHVTVLRNVRGRLAEVAIDPVPWSVHDFVLVHSHDGCYDIVDRW
PLQP
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcgaacccgaatcctgcgaccaccggcggcggccatcggctgttcttcgcgctg
tggccgacggatgacgtgcgcgtcgcgctcggtcgggccacgcacggcgtggagatgttc
gtcggggcgggtcgacgcaccgcgagcgaaaagcatcacctgacgctgcattttctcggc
ggctggcccgccccaccggacgacgtgattgaacaggcatgtgatgcggcggcaacggtg
cgcgccgacgcgctccgtcttgtcatcgatcatgcgggcggttttgcagcggcacgcgtg
ggttggcttgcgccttcggccaatgccgggctggaggcgctgtgggcttcgctcggacgg
gcgctggacgacgcaggcatccgctatcgctcgcacgaacgctttaccccgcatgtgacg
gttctacgcaacgtgcggggacgattggcggaggtcgcgatcgatcccgttccgtggtcc
gtccacgatttcgtgctcgtgcacagccacgacggttgctacgacatcgtcgatcgctgg
ccgcttcagccctag
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