Lysobacter sp. TY2-98: DWG18_12645
Help
Entry
DWG18_12645 CDS
T05586
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt03030
DNA replication
lyt03410
Base excision repair
lyt03420
Nucleotide excision repair
lyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DWG18_12645
03410 Base excision repair
DWG18_12645
03420 Nucleotide excision repair
DWG18_12645
03440 Homologous recombination
DWG18_12645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyt03032
]
DWG18_12645
03400 DNA repair and recombination proteins [BR:
lyt03400
]
DWG18_12645
Enzymes [BR:
lyt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DWG18_12645
DNA replication proteins [BR:
lyt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DWG18_12645
DNA repair and recombination proteins [BR:
lyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DWG18_12645
NER (nucleotide excision repair)
GGR (global genome repair) factors
DWG18_12645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
AXK73040
UniProt:
A0A345ZMR5
LinkDB
All DBs
Position
complement(2594670..2597426)
Genome browser
AA seq
918 aa
AA seq
DB search
MKKLVLIDGSSYLYRAFHALPPLTNEHGEPTGALFGVVNMLKAVLAEKPDYIAYVVDASG
PTFREALDPQYKAHRPPMPDDLRAQVQPLCDIVTALGITIIREEGVEADDVIGTLALRGF
EEGLDVTVSTSDKDFAQLVRDPVDGRGVALVNTMSGSRLDSTQRVIEKFGVRPDQIIDYL
ALMGDSVDNIPGVEKCGPKTAAKWLAEYGTLDGVIANAASIKGKIGENLARVLDRLPLNR
TLTTIKIDCEVPLGPQELALRERDHEKLRELFERYGMRQALRELEGGAATAPAASGSRGV
AAQVVSVESLDPALAAKGEYEAVLTQEQLDAWVAKLQAADEFAFDTETDSLDALCANIVG
LSFSVEPGHAGYIPVGHDYPGAPVQLDKAVVLNALAPILEDANKRKLGQHGKYDIHVLRC
HGVNVQGYADDTMLESFVLNATATRHDMDSLAKKYLGYDTIKYADVAGKGAKQIPFSQVA
LDDATRYAAEDADVTLRLHRVLSPKLREIPALESVYRDIEIPLIPVLERIEANGVMIDPD
ELRRQSADMGRRMLELQQRATEVAGRTFNMDSPKQIGALLFDELGLPATVKTPTGAPSVN
EEALEAIADQHELPRLILDYRGLAKLRGTYTDKLPEMLNPRTHRLHTSYHQAGAATGRLA
SSDPNLQNIPIRTEDGRRIRTAFIAPEGRRIVACDYSQIELRIMAHLSEDPALLRAFTSG
VDVHTATAAEVFGKTVDTVEANERRAAKAINFGLMYGMSAFGLATRLGISRGEAQDYIAL
YFARYPGVREYMDRTRQQAREQGYVETVFGRRLYLENIHARNQGLRSGAERAAINAPMQG
TAADIIKRAMIDIHGWLAGHAEQALMVLQVHDELVFEVDEGFVPTLVDEVKRRMSGAAEL
KVPLDVDAGIGRNWDEAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctcgtcctgatcgacggttccagctacctgtatcgcgcgtttcacgcgctg
ccgccgctcaccaacgagcacggcgagcccaccggcgcgctgttcggcgtggtcaacatg
ctgaaggcggtgctcgccgaaaagccggactacatcgcctacgtggtcgacgcatccggg
cccaccttccgtgaggcgctggacccgcagtacaaggcgcatcgcccgccgatgccggac
gacctgcgcgcgcaggtgcagccgctgtgcgacatcgtcaccgcgctcggcatcacgatc
atccgggaggagggtgtcgaagcggacgacgtgatcggcacgctcgcgctgcgcggtttc
gaggaaggtttggacgtcaccgtgtcgacctccgacaaggatttcgcgcagctggtgcgc
gatccggtcgacggccgcggcgtcgcgctggtcaataccatgagcggcagtcgcctcgat
tcgacgcagcgcgtgatcgagaaattcggcgtgcggccggatcagatcatcgactacctc
gcgctgatgggcgacagcgtcgacaacattccgggcgtcgagaaatgcgggccgaagacc
gccgccaagtggctggccgaatacggcacgctcgatggcgtgatcgcgaacgcggcgtcg
atcaagggcaagatcggcgagaacctcgcgcgcgtgctcgatcgcctgccgctcaatcgc
acgctgacgacgatcaagatcgactgcgaggtgccgctcggtccgcaggagctcgcactg
cgcgaacgcgaccacgagaagttgcgcgaactgttcgagcgctacgggatgcgccaagcg
ctgcgcgaactcgaaggtggtgcggcgactgcgccggcagcatcgggcagccgcggtgtc
gccgcgcaggtggtgtcggtggaatcgctcgatcctgcactcgccgcgaagggcgaatac
gaggcggtgctcacgcaggaacagctcgacgcctgggtcgcgaagctgcaggccgccgac
gaattcgcgttcgacacggaaaccgattcgctggatgcgctgtgcgcgaacatcgtcggc
ctgagtttctcggtcgagcccggccacgccggctacatcccggtcggccacgactatccg
ggtgccccggtacagctcgacaaggcagtggtgctcaatgcgctcgcgccgatcctcgag
gacgcgaacaagcgcaagctcggccagcacggcaagtacgacatccatgtgctgcgctgc
catggcgtcaacgtgcagggctatgcggacgacacgatgctggagagcttcgtgctcaat
gcgaccgcgacgcgccacgacatggattcgctggccaagaagtacctcggctacgacacg
atcaaatatgccgacgtcgccggcaagggcgcgaaacagattcccttctcgcaggtcgcg
ctcgacgacgccacgcgctacgccgcggaggatgccgacgtcacgctgcgcctgcatcgc
gtgctgtcaccgaagctgcgcgagatcccggcgctggaatcggtctatcgcgacatcgag
attccgctgattccggtgctcgaacgcatcgaagccaacggcgtgatgatcgatccggac
gaactgcgccggcagtcggcggacatgggccgccgcatgctggagttgcagcagcgcgcg
acggaggtcgccggtcgcacgttcaacatggactcgcccaagcagatcggcgcgctgctg
ttcgacgagctcggcctgccggcgacggtgaagacgcccaccggtgcgccttcggtgaac
gaggaagcgttggaagcgatcgccgaccagcacgagctgccgcgcctgatcctcgactac
cgcggtctcgcaaaactgcgcggcacgtacaccgacaagttgccggagatgctcaacccg
cgcacgcatcgcctgcacaccagttatcaccaggccggtgcggcgacgggtcgcctcgcg
tcgagcgatcccaacctgcagaacattccgatccgcaccgaggacgggcgtcgcatccgc
accgcgttcatcgcgccggaaggccgccgcatcgtcgcctgtgactattcgcagatcgag
ctgcggatcatggcgcacctgtcggaagatccggcgctgctgcgcgcgttcacgtcgggc
gtcgacgtgcataccgcgaccgcggcggaagtgttcggcaagacggtcgacacggtcgaa
gcgaacgagcgtcgcgcggcgaaggcgatcaatttcggtctgatgtacggcatgagcgcg
ttcggtctcgcgacgcgcctgggcatctcgcgcggcgaagcgcaggactacatcgcgctc
tacttcgcgcgctatcccggcgttcgcgagtacatggaccgcacgcgccagcaggcgcgc
gagcagggctacgtcgagaccgtgttcggtcgcaggctgtacctcgagaacatccacgcg
cggaaccagggcctgcgttccggcgccgagcgcgcggcgatcaacgcgccgatgcagggc
accgcggcggacatcatcaagcgggccatgatcgacatccacggctggttggccgggcat
gccgagcaggcgctgatggtgcttcaggtgcacgacgaactggtcttcgaggtcgacgaa
ggcttcgtgcccacgctggtcgacgaggtgaagcggcggatgtcgggcgccgccgagctc
aaggtgccgctggacgtcgacgccggcatcggccgcaactgggacgaggcccactga
DBGET
integrated database retrieval system