Lysobacter sp. TY2-98: DWG18_12660
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Entry
DWG18_12660 CDS
T05586
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt03420
Nucleotide excision repair
lyt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DWG18_12660
03430 Mismatch repair
DWG18_12660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyt03400
]
DWG18_12660
Enzymes [BR:
lyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DWG18_12660
DNA repair and recombination proteins [BR:
lyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DWG18_12660
MMR (mismatch excision repair)
Other MMR factors
DWG18_12660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AXK73043
LinkDB
All DBs
Position
complement(2598472..2600649)
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AA seq
725 aa
AA seq
DB search
MDVSHLLDALNPAQREAVCAPLGHYLVLAGAGSGKTRVLTHRIAWLNEVERVPVHGILAV
TFTNKAAAEMRHRVDMQLSGGVRGMWLGTFHGLAHRLLRLHFQQANLPEGFQVLDSDDQL
RLVKRVMQGLELDETRYPPRQAAWWINARKDEGRRAQNIQGGEDEWTDTMRRIYAAYQER
CDRAGLVDFAELLLRAHELLRDSPQLLSHYRNRFKQILVDEFQDTNDIQYAFIRVLAGDT
GQVFVVGDDDQAIYGWRGAKVENVQKFLRDFDSAKTIRLEQNYRSTSTILDAANAVIAHN
PGRLGKKLWTDVAGGDPIDLYAAYNEIDEARFVVERAKQWVQAGGSYRDVAVLYRSNAQS
RAFEEVLIGEQVPYRVYGGLRFFERAEIKDALAYLRLITNRADDAAFERAVNTPTRGIGE
RTLDEVRRLARAEGFPLAAAAVKLASGTALAARARNALATFLKLIDDLQAECVDRTLPEK
IDHVLLRSGLREFYAREQKGQLDSRVDNLDELVSVASRFNWREDDEDEVELPELVAFLSY
AALEAGEGQARADQDGVQLMTLHSAKGLEFPLVFLVGLEEGLFPNNRSAEEAGRMEEERR
LAYVGITRAREKLVLSYAEARRIHGMDMYGMPSRFLREIPSSLVHEVRPKVQVSRPVYGA
GSRRTDTSLAETPAIPLGASVRHPTFGTGTVTDVEGSGAHARVQVNFDDVGSKWLVAAFA
NLQKI
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccaccttctcgacgcgctgaatcccgcgcagcgcgaggccgtctgcgca
ccgctcggccactacctcgtcctcgccggcgccggctccggcaagacgcgcgtgctcacc
caccgcatcgcctggctcaacgaggtcgagcgcgtgccggtgcacggcatcctcgccgtc
acgttcaccaacaaggccgccgcggagatgcgccaccgcgtcgacatgcagctctcgggc
ggcgtgcgcggcatgtggctgggcacgttccacggcctcgcgcaccggctgctgcgcctg
cacttccagcaggccaacctgcccgaaggtttccaggtgctggattcggacgaccagctg
cgcctcgtgaagcgcgtcatgcagggcctcgaactcgacgaaacgcgctatccgccgcgc
caggccgcgtggtggatcaacgcgcgcaaggatgaagggcgccgtgcgcagaacatccaa
ggcggcgaggacgagtggaccgacaccatgcgtcgcatctacgcggcgtaccaggagcgt
tgcgatcgcgccggactcgtcgacttcgccgagctgctgctgcgcgcccatgagttgctg
cgcgactcgccgcaactgctgtcgcactaccgcaaccgtttcaagcagatcctggtcgat
gagttccaggacaccaacgacatccagtacgccttcatccgcgtgctcgcgggcgatacg
gggcaggtgttcgtggtcggcgacgacgaccaggcgatctacggctggcgtggcgccaaa
gtcgagaacgtgcagaaattcctgcgcgacttcgacagcgccaagacgatccgcctcgag
cagaactaccgctccacatcgaccatcctcgacgccgcgaacgcggtgatcgcgcataac
cccgggcgcctcggcaagaagctgtggaccgacgtcgccggtggcgatcccatcgatctg
tacgccgcctacaacgagatcgacgaggcgcgtttcgtcgtcgaacgcgccaaacagtgg
gtgcaggcgggcggcagctatcgcgatgtcgccgtgctgtaccgctcgaacgcgcagtcg
cgcgccttcgaagaagtgctgatcggcgagcaggttccgtatcgcgtctacggcggcctg
cgcttcttcgagcgagcggaaatcaaggacgcgctcgcttacctgcgcctgatcaccaat
cgtgcggatgacgccgcgttcgaacgcgcggtcaacacgcccacacgtggcatcggcgaa
cgcacgctggacgaagtgcgccggctcgcgcgggcggaaggcttcccgctggccgccgcg
gcggtgaaactggcttcaggcaccgcgctcgccgcgcgtgcgcgcaatgcgcttgcgacc
ttcctcaagctgatcgacgacctgcaggccgagtgcgtcgaccgcacgctgccggaaaag
atcgaccacgtactgctgcgttcgggtcttcgcgagttctacgcgcgcgagcagaagggc
cagctcgattcgcgcgtcgacaacctcgacgaactcgtgtcggtggcgtcgcgcttcaac
tggcgcgaagacgacgaggacgaggtcgaactgcccgagcttgtggcgttcctgtcctat
gccgcgctcgaagccggtgagggccaggcacgcgcggaccaggacggcgtgcagctgatg
acgctgcacagcgcgaagggcctggagtttccgctggtgttcctggtcggcctcgaggaa
gggctgttcccgaacaaccgctccgccgaagaagcgggtcgcatggaggaggagcgtcgc
ctcgcctatgtgggcatcacccgcgcccgcgagaagctcgtgctgagctacgccgaagcg
cgccgcatccacggcatggacatgtacggcatgccgtcgcgcttcctgcgcgagataccg
tcgtcactcgtgcacgaggtgcggccgaaggtgcaggtgtcgcggccggtgtacggcgcc
ggcagtcgtcgcaccgacaccagcctggccgaaacgcccgcgattccgctgggcgcgtcg
gtgcgtcatcccacctttggcaccggcaccgtcaccgacgtcgaaggcagcggcgcgcac
gcgcgcgtgcaggtgaacttcgacgacgtcggcagcaagtggctggtcgcggcgttcgcg
aacctgcagaagatctga
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