Lysobacter sp. TY2-98: DWG18_13880
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Entry
DWG18_13880 CDS
T05586
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt02010
ABC transporters
lyt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DWG18_13880
03070 Bacterial secretion system
DWG18_13880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lyt02000
]
DWG18_13880
02044 Secretion system [BR:
lyt02044
]
DWG18_13880
Transporters [BR:
lyt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DWG18_13880
Secretion system [BR:
lyt02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DWG18_13880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
SbcC_Walker_B
DUF87
NB-ARC
AAA_18
AAA_21
AAA_30
Zeta_toxin
PRK
Motif
Other DBs
NCBI-ProteinID:
AXK73728
UniProt:
A0A345ZPQ3
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All DBs
Position
2853123..2855279
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AA seq
718 aa
AA seq
DB search
MITDAGSLAAIRPEAVQPPQDLALVGLVTLAQFHGIAADAAQLSHQFGRCDGDDGGVALL
LVAKSLGLKAKLIRQPAHRLAMAALPALAWDVDGSPFVVARVAEDGVLIHDLAERRPRQL
SRSDFEDRYGGRLLQLASRASVLGDLAKFDFTWFIPAVVKYRKLLIEVLVASLFIQLLAL
VTPLFYQVVMDKVLVHQAWTTLHVITFGLVSIAIFDVVLTGLRTFIFSHTTSKIDVELGA
RLFRHVLSLPLSYFESRRVGDTIARVRELENIRSFLTGQALTSVLDLVFTVVFLAVMFSY
SVWLTLIVLLSLPIYAAISAGITPVLRKRLDEKFKRNADNQSFLVETVSGIGTVKAMAVD
PRVTRTWDNQLAGYVAASFRVTRLAMLGQQGIQLVQKLVSIALLFFGAQLVISGKLSLGQ
LIAFNMLSAQVAMPILRLAQLWQDFQQVGISVQRLGDILNTRTELPGSRLALPPIQGRIT
FESVAFRYRPDGKQILDGVDLDIKAGEIIGIVGRSGSGKSTLTKLVQRLYTPERGRVLVD
GQDLSLADPAWLRRQLGVVLQENFLFNRSVRENIAMADPGMPLERVIAAAQLAGAHDFIV
ELPEGYDTVVGEHGTGLSGGQRQRIAIARALITNPRILILDEATSALDYESEHAVMSNMR
DICKGRTVLIIAHRLSTVRGANRIVVFEKGQIIESGSHAELVDRPGGAYANLYRLQQG
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgattacggacgcgggatcgctggcggcgatccggccggaggctgtgcagcctcctcag
gatttggcgctggtcggcctcgttacgctcgcccagttccacggcatcgcggcggacgcc
gcacaactgtcgcatcagtttggccggtgcgatggagacgacggcggggtagcgctgctg
cttgtcgcgaagtcgcttggactgaaagcaaagctgatccgccagcctgcgcatcgcttg
gcgatggccgcgttgcccgccctcgcgtgggatgtcgacggcagcccctttgtcgtcgcg
cgcgtcgctgaggacggggttctgatccatgacctcgcggaacgacgcccgcggcagctg
tcgcgcagcgacttcgaggaccgctatggcggccgcctgctgcagctcgcttcccgcgcg
tcagtgctcggcgatctggcgaagttcgacttcacctggttcattccggccgtcgtgaaa
taccgcaagttgctgatcgaagtgctggtggcctcgctcttcatccagctgctcgcctta
gtgacaccgctgttctaccaggtcgtcatggacaaggtgctggtgcaccaggcgtggacg
accctgcacgtcattaccttcggtctggtgtcgatcgcgatctttgatgtggtgctgacc
ggcctgcgcaccttcatcttttcgcacaccaccagcaagatcgatgtcgagctcggcgcg
cggttatttcgacacgtgctgtcattgcccctcagctatttcgagtcacggcgcgtgggc
gacacgatcgctcgcgtgcgcgagctggagaacatccgcagcttcctgaccggacaagcg
ctgacgtcggtcctcgacctggtcttcaccgtcgtcttcctcgcggtgatgttcagctac
agcgtatggctgacgttgatcgtgttgctctcgctgccgatctacgccgcgatttcggcg
ggtatcacgccggtgcttcgcaagcggctggatgagaaattcaagcgcaacgcggacaac
cagtcctttctcgtcgaaaccgtcagcggaatcggcaccgtcaaagcgatggcggtggac
ccgcgcgtgacgcgcacgtgggacaaccagcttgcgggttacgtcgcggcgagctttcgg
gtgacccgactcgccatgcttgggcagcaggggatccagctcgtacagaagctggtgagc
atcgcgctgttgttcttcggcgcgcagcttgtcatttccggcaagctctcgcttggccag
ctcatcgcgttcaacatgctatcggcgcaggtcgccatgccgatcctgcggctcgcgcaa
ctctggcaagacttccagcaggtcggaatctccgtccagcggctgggtgacatcctcaat
acgcgcacggagttgcccggtagtcgcctcgcgcttccgccgatccaaggtcgcatcacg
ttcgagagcgtggcgttccgctaccgcccggatggcaagcagatcctcgacggcgtcgat
ctggatatcaaggcgggcgaaatcatcggcatcgtcgggcgctcgggctcggggaagagc
acgctgaccaagctcgtgcagcggctctacaccccggagcgcggccgcgttctggtcgat
ggccaagatctctcgcttgccgacccggcgtggctgcggcgccagctgggtgtcgtgctg
caggaaaacttcctgttcaaccgtagcgtgcgcgaaaacatcgccatggccgacccgggc
atgccgctcgagcgtgtcatcgccgccgcgcagctcgccggcgcacacgacttcatcgtc
gagctgcccgaaggctatgacacggtggtcggcgaacacggcaccggcctgtcgggcgga
cagaggcagcgcatcgccattgcacgggcgctgatcaccaatccccgcatcctcattctc
gacgaagccacgagcgcgctcgactacgagtcagagcacgcggtaatgagcaacatgcgt
gacatctgcaagggacgcacggtgctgatcattgcccaccggctttcgacggtgcgcgga
gccaaccgcatcgtggtgttcgagaagggccagatcatcgagagcggaagccacgcagag
ctcgtcgatcggccgggcggcgcgtacgcaaacctgtatcgcctccagcagggataa
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