Lysobacter sp. TY2-98: DWG18_13960
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Entry
DWG18_13960 CDS
T05586
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DWG18_13960 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyt03400
]
DWG18_13960 (recC)
Enzymes [BR:
lyt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DWG18_13960 (recC)
DNA repair and recombination proteins [BR:
lyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DWG18_13960 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AXK73274
UniProt:
A0A345ZNE9
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All DBs
Position
2878481..2881996
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AA seq
1171 aa
AA seq
DB search
MGRECRHCRRAGAGAPIAAATACAAPVDAESPAQARLATFASFPTHRAMPRAAHLTRCDV
LRQDDRMAAASDFRLYHSNSLEILAGLMAEELRRPAAGQSLLTPDIVVIPQPSMRRWLQA
TLAQAHGVAANIVFLTPGELVARLLDANVDGRDQDLDADALRWRLYALLQDERTMRDPVL
RPLRAYLSPETGEIDALKAWSLAGALATTFDRYQAWRRDWLLAWDAGASPRDPQAVLWRR
LGADRPHRARRIQRYLERFGVDGDGTPAGLPPRLFVFATLNVSPDTLRVIASASRVGPLH
FYLPSPVAAYWGDVRTLPHRLALGDAAAFGDVLDTDDNPLLQAWGAAGRDFMAVLGGYET
VHPSFDLPAYDDPEARGFDALREPLLGRIKRDLLHRRPVPTTPWRATLDVTDASLQVHAA
PTRLREVQVLHDQLRALLEDARFDPPLEPREIAVLAPDIDPYLPYIEAVFGGVHGRTDFI
PYTVADTSPLADEPLADVFSRLLALPVSRLGLHEVLDLLATPAIAQHAGLDPASLDRLRD
WLQAAGACWGLDAAHRVKHGAPDDALYTWQFALDRLLIGHATGSDALLGDVAGFPELEGS
DLAALDTLIGLVRVLARYERVLSNAMTAEQWRERLLALLAAVLPERPRDTADERALDRLR
ALIDDFADAARRAAMTAPIEPEVVRAHFDAKLAEPDTRAPLMGGGVSFGRMVPMRLLPFR
AICILGLNDGDFPRRDPAGGLNQIAHELDGPHRRRGDRSLRDDDRFIFLQLLASANDVFY
LSYLGADPHDGSLREPSALVHELLDVAAGYHADARDARKRFVVRHPLQPFSAEAFGADGH
GIEPRRFSYRGEWQQAAHTSPLRRRELPPWIGAPLPHAEPPTRDVALRDLAAFLRSPPDA
FLRQRLQLRLPDAGAPLIDVEPLVLERRATDLLRDAVFDAQVSGRTQQLARRLQSQGLLP
AGVYGQRVLDEVVHEVRPFSELFTGWRGDAGADDVAIDLELGAQRLHGRLRDVHPHGLAR
LRFGELNGPTQIAHGLDWLAACALDRAMPLVQFALHDGRVAAVERAPIAAAQARDVLAML
LALRETGLTEPLPFGAYAGWAWYDGQDDRAWKAARERWLNVRGWAEGGTPAMQLALRGRD
PFAREDAAARFQALARRVFDAVLHARAEIDA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtgcaggcattgtcgcagggcgggcgccggcgcaccaatcgcggctgca
acggcgtgtgccgcgccggtcgacgctgaatctcccgcacaagcgagactcgcgacgttc
gcgtcgttcccgacgcaccgggcgatgccgcgagccgcgcatctcacccgctgcgacgtc
ctgcggcaagatgaccggatggccgcggcctccgatttccgcctgtaccactcgaattcg
ctggaaatcctcgccggactgatggccgaggaactccggcggccggcggctgggcagtcg
ctgctgacgcccgacatcgtggtcatcccgcagccgtccatgcgccgctggctgcaggcc
acgctggcgcaggcgcatggcgtcgccgcgaacatcgttttcctcacgccgggcgagctg
gtcgcgcgcctgctcgacgccaatgtcgacggtcgcgatcaggatctcgatgccgacgcc
ctgcgctggcggctgtacgcgctgctgcaggacgagcgcacgatgcgcgatccggtgctg
cgcccgttgcgtgcgtacctgtcgccggagacgggcgagatcgatgcgctgaaggcgtgg
tcgctggccggcgcgctcgccacgacgttcgatcgttaccaggcctggcgtcgcgactgg
ctgctcgcttgggacgccggcgcgtcgccgcgcgatccgcaggcagtgctgtggcggcgc
ctgggcgctgaccgcccgcatcgcgcgcgccgcatccagcgctacctcgaacgcttcggt
gtcgacggcgacgggacgcctgccggattgccccctcgactattcgtgttcgccacgctc
aatgtctcgcccgacacgctgcgcgtgatcgcgagcgcgtcgcgcgtcggtccgctgcac
ttctacctgccgtcgccggtcgccgcgtactggggcgacgtgcgcacgctgccgcatcgc
ctcgcactcggcgacgccgctgcgttcggcgacgtgctcgacaccgacgacaacccgctg
ttgcaggcctggggcgcggccggtcgcgacttcatggcggtgctcggcggttacgagacc
gtgcatccgtcgttcgacctgccggcgtacgacgatcccgaggcgcgcggtttcgatgca
ttgcgcgagccgctgctcgggcgcatcaagcgcgacctgctgcatcgtcgccccgtgccg
acgacaccgtggcgcgcgacgctcgacgtcaccgacgccagcctgcaggtgcatgcggca
ccgacgcggctgcgcgaagtacaagtgctgcacgaccagctgcgcgcgctgctcgaggac
gcgcgtttcgatccaccgctggagccgcgcgagatcgccgtgctcgcgccggacatcgac
ccttacctgccctacatcgaagccgtcttcggtggcgtgcacggccgcaccgacttcatt
ccctataccgtcgccgacaccagcccgctggccgacgaaccgctggccgacgtgttctcg
cgcctgctcgcgctgccggtgtcgcgcctcggcctgcacgaagtactggacctgctcgcg
actcccgcgatcgcgcagcacgcgggactggaccctgcatcgctcgaccgcctgcgcgac
tggctgcaggccgccggtgcgtgctggggcctcgacgccgcgcatcgcgtcaaacacggc
gcgcccgacgacgctctctacacctggcagttcgcgctcgaccgcctgctgatcggtcat
gcgacgggttcggacgcgctgctcggcgacgtcgccggttttcccgaactcgaaggcagc
gacctggctgcgctcgacacgctgatcggtctcgtccgcgttctcgcgcgctacgagcgc
gtgctgtcgaacgcgatgaccgccgagcagtggcgcgaacgcctgctcgcgctgcttgcg
gcggtgttgccggaacgtccgcgcgacaccgccgacgagcgcgcgctcgaccgcctgcgc
gcgctgatcgacgacttcgctgatgccgcgcgccgtgccgcgatgaccgcgccgatcgag
cccgaggtcgtgcgtgcgcacttcgacgccaagctggccgagcccgacacgcgtgcgccg
ttgatgggcggcggcgtcagtttcggtcgcatggtgccgatgcgcctcctgccgttccgc
gcgatctgcatcctcggcctgaacgacggcgactttccgcgtcgcgatcccgcgggcggt
ctcaaccagattgcgcacgaactcgacggtccgcaccggcgtcgtggcgaccgctcgcta
cgcgacgacgaccgcttcatattcctgcagttgctggcgtcggcgaacgacgtcttctac
ctcagctacctcggcgccgatccccacgacggcagcctgcgtgaaccctcggcgctggtg
cacgagctgctcgacgtcgcggcgggttatcacgccgacgcacgggacgcgcgcaagcgt
ttcgtcgtgcgccatccgctgcagccgttctccgcggaagcgttcggcgcggacggccac
ggcatcgagccgcggcgtttcagctaccgcggcgaatggcagcaggctgcgcacacatcg
ccgctgcggcgtcgcgagctgccgccgtggatcggcgcgccgctgccgcacgcggaaccg
ccgacacgcgacgtcgccttgcgcgaccttgccgcattcctgcgcagcccgcccgacgcc
ttcctgcgccagcgcctgcaactgcgcctgcccgacgccggcgcgccgctgatcgacgtc
gaaccgctggtgctggagcgccgtgccaccgatctgctgcgcgacgcggtgttcgacgcg
caggtgagcggccgcacgcagcagctcgcacgtcgcctgcaatcgcaggggctgttgcct
gcgggcgtgtacggccagcgcgtgctcgacgaagtcgtccacgaggtgcgcccgttctcc
gaactgttcaccggctggcgtggcgacgcgggcgcggacgatgtcgcgatcgacctcgaa
ctcggcgcgcagcgtctgcacggccgcctgcgcgacgtgcatccgcacggcctcgcgcgc
ctgcgtttcggcgagttgaacggtcccacacagatcgcgcacggcctcgactggctcgcc
gcctgcgcgctcgaccgcgcgatgccgctggtgcagttcgcgctgcacgacggtcgcgtc
gccgcggtcgaacgcgcaccgatcgcggcagcgcaggcgcgcgatgtcctcgccatgctg
ctcgcactgcgcgaaaccgggctcaccgaaccgcttcccttcggcgcctacgcgggctgg
gcctggtacgacggccaggacgatcgcgcctggaaagccgcgcgcgaacgctggctcaac
gtacgtggctgggccgaaggcgggacgccggcgatgcaactcgccctgcgcggtcgcgat
ccgttcgcgcgcgaggatgcggcggcgcggttccaggcgctcgcgcgtcgcgtcttcgac
gccgtgctgcatgcacgcgcggagatcgacgcatga
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