Lysobacter sp. TY2-98: DWG18_14020
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Entry
DWG18_14020 CDS
T05586
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lyt
Lysobacter sp. TY2-98
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyt03032
]
DWG18_14020
03400 DNA repair and recombination proteins [BR:
lyt03400
]
DWG18_14020
Enzymes [BR:
lyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DWG18_14020
DNA replication proteins [BR:
lyt03032
]
Prokaryotic type
DNA Topoisomerases
DWG18_14020
DNA repair and recombination proteins [BR:
lyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DWG18_14020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AXK73285
UniProt:
A0A345ZNG0
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Position
2896507..2897706
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AA seq
399 aa
AA seq
DB search
MSVPAPTPESARAAREAGLVYVSDAEPGIRRRKKGDGFSYVDIDGKTISDEATLARIRAL
AIPPAYTDVWICTDPDGHLQATGRDAKGRKQYRYHADWAAVRGDGKFERIIAFGEALPKL
RRRLSKDLKLPGFPRDKVLAIVVSVMARTLIRVGNDSYARSNRSFGLTTLRNRHVGFLRG
GRAKFAFRGKSGLEHEIVLDDANLVKLVKHCQQLPGQSLFQYLDDDGATQPVGSAQVNDY
LRDALGEAFTAKDFRTWGGTLAAIEKFEAIDVPEDASERALASIEKQVLTEVADVLGNTP
AVCRKAYVDPAVFEGWRSGRLRQFTEGARSGRSWELAALRFLRDARRRAAAESRAAKKAL
RTTRRRTRAGAEQAPRRATRTRARSPQAPVTQQGAAPPV
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttcctgcgcccacacccgaaagcgcgcgcgccgcgcgcgaggccggactggtc
tacgtcagcgatgccgaacccggcatccgtcgccgcaagaagggcgacggcttcagctac
gtcgacatcgacggcaagacgatcagcgatgaggccacgctcgcgcgcattcgtgcgctc
gcgattccgcccgcctacaccgacgtgtggatttgcaccgatcccgatggccacctgcag
gcgaccgggcgcgatgcaaaaggccgcaagcagtaccgctaccacgcggactgggcggcg
gtgcgcggcgacggcaagttcgaacgcatcatcgcgttcggcgaggcgctgcccaagctg
cggcgtcgcctgtcgaaggatctgaagctgcccggctttccgcgcgacaaggtgctcgcg
atcgtggtgtcggtgatggcgcgtacgctgatccgcgtgggcaacgacagctacgcgcgc
agcaaccggtcgttcgggctgaccacgctgcgcaaccggcatgtcggcttcctccgcggc
gggcgcgcgaagttcgcgtttcgaggtaagtccggcctggagcacgagatcgtgctcgac
gacgcgaatctggtgaaactggtcaagcactgccagcagctgccggggcagtcgctgttc
cagtacctcgacgacgacggcgcgacgcagcccgtgggctccgcgcaggtcaacgactac
ctgcgcgatgcgctgggcgaagcgttcacagcgaaggacttccgcacctggggcggcacg
ctcgcggcgatcgagaaattcgaagccatcgacgtgcccgaggacgcgagcgagcgcgct
ctggcatcgatcgagaagcaggtgctcaccgaggtggcggacgtgctcggcaatacgccg
gcggtgtgccgcaaggcctacgtcgacccggccgtgttcgaaggttggcgtagcgggcga
cttcggcagttcaccgagggcgcgcgcagtggtcgaagctgggaactcgccgccctgcgc
ttcctgcgtgatgcgcgccgtcgtgccgcggccgaatcgcgtgcggcgaagaaggcgctg
cgcaccacgcggcgccgcacgcgtgcgggtgccgaacaggcgccgagacgggcgacgcgc
acgcgcgcccgctcaccgcaggcgccggtcacccagcagggtgcggcgcccccggtgtag
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