Lysobacter sp. TY2-98: DWG18_14560
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Entry
DWG18_14560 CDS
T05586
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
lyt
Lysobacter sp. TY2-98
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyt03021
]
DWG18_14560 (rpoH)
Transcription machinery [BR:
lyt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DWG18_14560 (rpoH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_terminase
HTH_3
UCR_14kD
IF2_N
KORA
HTH_10
HTH_11
GntR
Motif
Other DBs
NCBI-ProteinID:
AXK73380
UniProt:
A0A345ZNQ5
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All DBs
Position
3038029..3038916
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AA seq
295 aa
AA seq
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MTQTASTALVTNNLPTVASVGLSPLGSLEAYIGAVNRIPVLSVDDEQRLARRYRDEEDLD
AARELVHSHLRFVVHVARGYNGYGLGIGDLIQEGNIGLMKAVKRFDPDQGVRLVSFAVHW
IRAEMHEFILKNWRIVKVATTKAQRKLFFNLRKSKKRLGWMNADEVRAVAADLNVSEREV
LEMESRLSGRDIGFDAPDDGDEDGPPSPVAYLAAQGEDPSQLYEREDEEDNHLEVLREGL
AELDARSRDIVKRRWLDSEAKVTLQELADEYGVSAERIRQIEANALKKMRALFAA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacccagacagcctccactgctctcgtcaccaacaacctgccgaccgtcgcgtcggtg
ggtctgagcccgcttggctcgctcgaggcatatatcggggcggtgaatcgcattccggtg
ctcagcgtcgacgacgaacagcgccttgcgcgccgttatcgcgacgaggaagacctcgac
gccgcgcgtgagctcgtgcactcgcacctgcgcttcgtcgtgcacgtcgcgcgcggctac
aacggctacggcctcggcatcggtgaccttatccaggaaggcaacatcggcctgatgaag
gccgtgaagcgcttcgatccggatcagggcgtacgcctcgtgtcgttcgcggtccattgg
atccgtgcggagatgcacgagttcatcctgaaaaactggcgcatcgtgaaggtcgccacg
accaaggcgcagcgcaagctgttcttcaacctgcgcaagagcaagaagcgcctcggttgg
atgaacgccgacgaggtgcgcgcggtcgccgccgacctcaacgtgtccgagcgcgaagtg
ctcgagatggaatcgcgcctgtcaggtcgtgacatcggcttcgacgcgccggacgatggt
gacgaggacggtccgccgtcgccggttgcctacctcgccgcgcagggcgaagacccgtcg
cagctgtacgagcgcgaggacgaagaggacaaccacctcgaagtgctgcgcgaaggcctg
gccgagcttgacgcgcgctcgcgcgacatcgtcaagcgtcgctggctcgacagcgaagcg
aaggtgacgctgcaggaactcgccgacgaatacggcgtctctgccgagcgcattcgccag
atcgaggcgaacgcgctcaagaagatgcgcgcgctgttcgcggcgtaa
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