Lysobacter sp. CW239: H2514_00020
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Entry
H2514_00020 CDS
T10688
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lyw Lysobacter sp. CW239
Brite
Enzymes [BR:
lyw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
H2514_00020 (gyrB)
DNA replication proteins [BR:
lyw03032
]
Prokaryotic type
DNA Topoisomerases
H2514_00020 (gyrB)
DNA repair and recombination proteins [BR:
lyw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H2514_00020 (gyrB)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QOD91124
UniProt:
A0A7L8CWR1
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Position
4544..7024
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AA seq
826 aa
AA seq
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MTQIEHDPSSLQDGTVPSPASPSTQTYDSSKITVLRGLDAVRKRPGMYIGDVHDGTGLHH
MVFEVVDNAVDEALAGHANEIVVTLHEDGSVEVSDNGRGIPVDIHKEEHVSAAEVILTVL
HAGGKFDDNSYKVSGGLHGVGVSVVNALSEHLWLDIWRDGFHYQQEYQLGEPLYPLKQLD
ATSKRGTVLRFKPATTIFSDVEFHYEILAKRLRELSFLNSGVKIVLKDERGEGRTDVFEY
EGGIRSFVEHLAQLKTPLHPNVISVTGEENGITVDVAIQWTDAYQETMFCYTNNIPQKDG
GTHLIGFRAALTRTLTNYIEQSGLAKQAKVSLSGDDMREGMIAVLSVKVPDPSFSSQTKE
KLVSSDVRPVVEHTFGARLEEFLQEHPTEARAIAGKILDAARAREAARKARDLTRRKGAL
DIAGLPGKLADCQEKDPALSELFIVEGDSAGGSAKQGRNRKTQAILPLKGKILNVERARF
DRMLSSAEVGTLITALGTGIGKDDYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQM
PELIERGHIYIGLPPLYKIKQGKTELYLKDDAALNAYLAGNAIEGAALIPAEGEPPITGA
ALERLLLAYIGARETISRNAHRYDPNVLEVLIDFTPLDTEHLAQNIDQREELDALEKRIN
RKGLGKPRYALSLQPATDSHPAALVAKRSHMGEELLQVLPLAAFAGGELRPLREAAAQLH
GLVREGAKIVRGNREQAIDSFADAHAWLMDEAKKGRQIQRFKGLGEMNPEQLWETTVNPD
TRRLLQVKIEDAVAADQVFSTLMGDVVEPRRAFIEDNALKAGNLDI
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgacccagatcgaacacgatccttcgtccctccaggacggcactgtgccgtctcccgcc
agcccctcgacgcaaacctacgactccagcaagatcaccgtcttgcgtgggctggatgcc
gtgcgcaaacgccccggcatgtacatcggcgacgtgcacgacggcaccgggctgcaccac
atggtgttcgaggtggtcgacaacgcggtggacgaagcgctcgccggccatgccaacgag
atcgtggtgaccctgcacgaagacgggtcggtggaagtctccgacaacggccgcggcatc
ccggtggacatccacaaggaagagcacgtgtccgcggcggaagtgatcctgaccgtgctg
cacgccggcggcaagttcgacgacaacagctacaaggtgtcgggcggccttcacggcgtc
ggcgtgtcggtggtcaacgccctgtcggagcacctgtggctcgacatctggcgcgacggt
ttccactaccagcaggagtatcagctgggcgagccgctgtatccgctcaagcagctggat
gcgaccagcaagcgcggcacggtgttgcgcttcaagccggcgaccacgattttcagcgac
gtcgagttccactacgagatcctcgccaaacgcctgcgcgagctgtcgttcctgaactcc
ggggtgaagatcgtcctgaaggacgagcgcggcgagggccgcaccgatgtgttcgagtac
gagggcggcatccgttccttcgtcgagcacctggcccagctgaaaacgcccctgcacccg
aacgtgatctcggtaaccggcgaggaaaacggcatcaccgtggacgtcgcgatccagtgg
accgacgcctaccaggaaacgatgttctgctacaccaacaacatcccgcagaaggacggc
ggcacccacctgatcggtttccgcgcggcgctgacccgcacgctgaccaactacatcgag
cagagcggcctggccaagcaggccaaggtcagcctgtccggtgacgacatgcgcgaaggc
atgatcgcggtgctgtcggtcaaggtgcccgatccgagcttctcgtcgcagaccaaggaa
aaactcgtctcatccgacgtgagaccggtcgtcgaacacacgtttggtgcgcgtctggag
gagttcctgcaggagcatccgaccgaggcgcgtgcgattgccggcaagatcctcgacgcc
gcgcgtgcccgcgaagccgcccgcaaggcccgcgacctgacccgccgcaagggcgcgctg
gatatcgccggcctgccgggcaagctggccgattgccaggagaaggatcccgcgctgtcc
gaactgttcatcgtcgagggtgactccgccggtggctcggccaagcagggccgcaaccgc
aagacccaggcgatcctgccgctcaagggcaagatcctcaacgtcgagcgcgcccgtttc
gaccgcatgctttccagcgccgaggtcggcacgctgatcaccgccctgggcaccggcatc
ggcaaggacgactacaaccccgacaagctgcgctaccaccgcatcatcctgatgaccgac
gccgacgtcgacggcagccatatccgcaccttgctgctgaccttcttctaccggcagatg
ccggagttgatcgagcgcggccatatctatatcggcctgccgccgctgtacaagatcaag
cagggcaagaccgagctgtacctcaaggacgacgcggccctgaacgcctacctggcgggc
aacgcgatcgagggcgcggccctgattccggccgaaggcgagccgccgatcaccggcgcg
gcgttggagcggttgctgctggcctatatcggggcgcgcgagacgatctcgcgcaacgcc
catcgctacgatcccaacgtgctggaagtgctgatcgacttcacgccgctggatacggaa
cacctggcccagaacatcgaccagcgcgaggaactggacgcgctggaaaagcgcatcaac
cgcaagggactgggcaagccgcgctatgcgttgagtctgcaacccgccacggacagccat
cccgcggcactggtggccaagcgcagccacatgggcgaggagttgctgcaggtgctgccg
ctggcggcgtttgccggcggtgaactgcgtcccctgcgcgaagccgcggcccaattgcac
ggcctggtgcgtgaaggcgcgaagatcgttcgtggcaaccgcgagcaggccatcgacagc
ttcgccgatgcccacgcctggctgatggacgaggccaagaagggacgtcagatccagcga
ttcaagggcctgggtgagatgaatccggaacagttgtgggaaaccacggtcaatccggac
acccgacgcctgctgcaggtgaagatcgaggatgcggtcgcggcggaccaggtgttcagc
accctgatgggcgacgtggtcgaaccgcgtcgcgcgttcatcgaggacaacgcgctgaag
gccggcaacctggatatctga
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