Lysobacter sp. CW239: H2514_00660
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Entry
H2514_00660 CDS
T10688
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lyw Lysobacter sp. CW239
Brite
KEGG Orthology (KO) [BR:
lyw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyw03032
]
H2514_00660
03400 DNA repair and recombination proteins [BR:
lyw03400
]
H2514_00660
Enzymes [BR:
lyw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H2514_00660
DNA replication proteins [BR:
lyw03032
]
Prokaryotic type
DNA Topoisomerases
H2514_00660
DNA repair and recombination proteins [BR:
lyw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H2514_00660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QOD91237
UniProt:
A0A7L8CZH9
LinkDB
All DBs
Position
complement(167881..170364)
Genome browser
AA seq
827 aa
AA seq
DB search
MAKNLLIVESPAKAKTINKYLGKDFIVLASYGHVRDLIPKEGAVNPADHFAMRYDLIEKN
EKHVEAIAKAAKKAEAVYLATDPDREGEAISWHIAEILRERGLLDNKLLKRVVFTEITPR
AINEAMAHPRDIASDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFKAREYWSIVAECQHPGQAFSARLTKLDGNKFEQFTITDGDTAEAARQRIVS
AAGGALQVTDVTSKERKRRPAAPFTTSTLQQEAARKLGFTTKRTMQVAQKLYEGVALGGE
EGTVGLISYMRTDSVALSAEAVAEIRDVIARDYGSGAVPDQPNVYKSKAKNAQEAHEAVR
PTSALRTPAQMANFLEDDARRLYELIWKRAVASQMVPATLNTVSVDLAAGSEHSFRVSGT
TVVDPGFLAVYEEGKDAKAADADDEGRKLPPMKTGERIPLQQINANQHFTEPPPRFSEAS
LVKTLEEYGIGRPSTYASIIATLLFRKYVELESRRFRPSDVGRAVSNFLSGHFTRYVDYD
FTAKLEDELDAVSRGEEEWVPLMERFWTPFKEMVDDKMESVDRSQATGARELGTDPKTGK
PVSVRLGRYGPYAAIGSTAEDEEEKPTFASLRPGQSMHTISLEDALELFKMPRKLGFDKD
EEVSVGIGRFGPFAKRGSVYASLKKEDDPYTIDLARAVFLIEEKEEIARNRIIKQFEGSD
IQVLNGRYGPYLSDGKLNGKIPKDREPASLTLEEVIQLMEETGKPMRKGFGKKAVAKKAP
AKKAVAKAPAKKAAKKAVKKAAKKAVKKVAAKKATKTATKKVAKTAD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaacctccttatcgtcgagtcgcccgccaaggccaagacgatcaacaaatac
ctcggcaaggacttcatcgtcctggcgtcctacggccacgtgcgcgacctgatcccgaag
gagggcgcggtcaatcccgccgaccacttcgcgatgcgctacgacctgatcgagaagaac
gagaagcacgtcgaggcgatcgccaaggccgccaaaaaagcggaggcggtgtacctggcg
actgacccggatcgcgaaggcgaggcgatcagctggcacattgccgagatcctgcgcgag
cgcgggctgctggacaacaagctgctcaagcgcgtggtgttcaccgagatcaccccgcgc
gcgatcaacgaggcgatggcccatccgcgcgatatcgccagcgacctggtcgacgcgcag
caggcgcgccgcgcgctggactacctggtcggcttcaacctgtcgccggtgctgtggcgc
aaggtccagcgcggcctgtccgccggccgcgtgcagtcgccggcgctgcgcatgatcgtc
gagcgcgaggaggagatcgaggcgttcaaggcgcgcgaatactggtccatcgtcgccgag
tgccagcaccccggacaggcattcagcgcccggctgaccaagctggacggcaacaagttc
gagcagttcaccatcaccgacggcgataccgccgaggccgcccgccagcgcatcgtcagc
gcggccggcggtgccctgcaggtcaccgatgtcaccagcaaggagcgcaagcgccgcccg
gccgcgccgttcaccacctcgaccctgcaacaggaagccgcgcgcaagctcggcttcacc
accaagcgcaccatgcaggtcgcgcagaagctgtatgaaggcgtcgcgctcggcggcgaa
gaaggcaccgtcggcctgatcagctacatgcgtaccgactcggtcgccctgtcggccgag
gccgtcgccgagatccgcgacgtgatcgcgcgcgactacggcagcggcgcggtgcccgac
cagcccaacgtgtacaagtccaaggccaagaacgcgcaggaagcgcacgaggcggtacgt
ccgacctccgcgttgcgcacgccggcgcagatggcgaacttcctggaagacgacgcccgc
cgcctgtacgagttgatctggaagcgcgccgtggccagccagatggtgccggccacgctc
aatacggtctcggtcgacctggctgccggcagcgagcacagcttccgcgtgtcgggcacc
accgtggtcgatccgggcttcctggccgtgtacgaggaaggcaaggacgcgaaggccgcc
gatgccgacgacgagggccgcaagctgccgccgatgaagaccggcgagcgcatcccgctg
cagcagatcaacgccaaccagcacttcaccgagccgccgccgcggttctccgaagcctcg
ctggtgaagacgctggaggagtacggcatcggccggccgtcgacctacgcctcgatcatc
gccaccttgctgttccggaaatacgtcgagctggaaagccgccgcttccgcccgagcgat
gtcggccgcgcggtcagcaacttcctgtccggccatttcacccggtacgtcgattacgac
ttcaccgccaagctcgaggacgagctggacgcggtgtcgcgcggcgaggaggaatgggtg
ccgttgatggagcggttctggacgccattcaaggagatggtcgacgacaagatggaatcg
gtcgaccgcagccaggcgaccggcgcgcgcgaactgggcaccgatccgaaaaccggcaag
ccggtcagcgtgcgtctgggccggtacgggccgtatgccgcgatcggcagcaccgccgag
gacgaggaggagaagccgactttcgcctcgctgcggccgggccagagcatgcacaccatc
tcgctggaggacgcgctggagctgttcaagatgccgcgcaagctgggcttcgacaaggac
gaggaagtcagcgtcggcatcggccgcttcgggccgttcgccaagcgcggcagcgtgtat
gcgtccctgaagaaggaagacgatccgtacaccatcgacctggcgcgcgcggtgttcctg
atcgaggagaaggaagagatcgcgcgcaaccggatcatcaagcagttcgagggcagcgac
atccaggtcctcaacggccgttacggcccgtacctcagcgacggcaagctcaacggcaag
atccccaaggaccgcgaaccggcctcactcacgctggaggaagtcatccagctgatggag
gaaaccggcaagccgatgcgcaaggggttcggcaagaaggcggtggcgaagaaagcaccg
gccaagaaagccgtggcaaaagcgccggcaaaaaaggccgcgaagaaagctgtgaaaaaa
gccgccaagaaggccgtcaagaaagttgctgcgaagaaggcgaccaagaccgcgacgaag
aaggtcgccaagaccgcggactga
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