KEGG   Lysobacter sp. CW239: H2514_01085
Entry
H2514_01085       CDS       T10688                                 
Name
(GenBank) ribonucleoside-diphosphate reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
lyw  Lysobacter sp. CW239
Pathway
lyw00230  Purine metabolism
lyw00240  Pyrimidine metabolism
lyw01100  Metabolic pathways
lyw01232  Nucleotide metabolism
Module
lyw_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
lyw_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:lyw00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    H2514_01085
   00240 Pyrimidine metabolism
    H2514_01085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lyw03400]
    H2514_01085
Enzymes [BR:lyw01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     H2514_01085
DNA repair and recombination proteins [BR:lyw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    H2514_01085
SSDB
Motif
Pfam: Ribonuc_red_lgC LAGLIDADG_3 Intein_splicing Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: QOD92319
LinkDB
Position
267557..270829
AA seq 1090 aa
MGTLINDDAVATDIPMQPASLDIWDKKYRLVTKDGVPVDADIDATYRRVAKALADSEPTP
ELRQYWNERFAWALRRGAIPAGRITSNAGALEHKPATSTINCTVSGTIEDSMDGILQKVH
EAGLTLKAGCGIGYEFSTLRPRGAFVAGAGAYTSGPMSFMDIYDKMCFTVSSAGGRRGAQ
MGTFDVSHPDVKDFIRAKREDGRLRQFNLSLLITDGFMQAVKDDADWPLVFPVNRKEKND
VDFDDPAQVVWRDWPTHRNYIVGDDGLVACKVYGHIRARHLWDMIMVSTYDYAEPGFILI
DRVNEMNNNWWCENIRATNPCVTADTWVQTSAGPRQVAELLGRPFEARVDGVDHATTAEG
FFHTATKPVFALQTREGHRLRLTADHRVRRVSRLTRWSVDTEWCAAGDLVAGDRVLLNDH
RDNAHWAGDLDLEQGYLLGLLVGDGTLKHEAAVLSVWSAVAQANGPAAQVGTGTLALMQE
AERCARTLPHRADFAGWSAVAGRGEWRLKSAALRDLANDMGMTVGDKSITPALERASSEG
YRGFLRGLFDADGSVQGSQEKGISVRLAQSDLPRLEAAQRMLLRLGVPSTIYRDRRPAGT
ALLPDGRGGSAGYATRAQHELVISGEALARYAELIGFADTDKAARLTRALSGYRRALNRA
RFVATVDSVTADGVEDVYDVQVPGINTFDGNGIHAHNCGEQPLPAYGACLLGSVNLTKFV
RNAFTDQAEFDWDEYKEVVRVFTRMLDNVVEVNGLPLEKQREEILRKRRHGMGFLGLGST
VTMLKMKYGSAESCEFTERVAREMAVAGWEMGLELAKEKGPAPIMDETFKVDAEMLRKRP
EMVADGWKIGQDVPGKVLHAKYSRYMQRVAEVAPELVAELTEVGARFTHHSSIAPTGTIS
LSLANNASNGIEPSFAHHYSRNVIREGKKSKEKVDVFSFELLAYRALVNPAAMPFSEEAA
TRLPDYFIAADEVSPKQHVDVQAAAQKWVDSSISKTANVPTDYPYEDFKDIYTYAHAQGL
KGCTTFRFNPAAFQGVLVKEADLENTTYRFELEDGSVVEAKGNQEIEYDGEMHTAANLFD
ALKEGYYGKF
NT seq 3273 nt   +upstreamnt  +downstreamnt
atgggcacgctgatcaacgacgacgcggtggccacggacatcccgatgcaaccggcatcg
ctggatatctgggacaagaagtaccggctggtcaccaaggacggcgtgccggtcgatgcc
gacatcgacgcgacctaccgccgcgtggcgaaagcgctggccgattcggagccgacgccc
gagctgcgccagtactggaacgagcgcttcgcctgggcgctgcgccgcggtgccatcccc
gccggccgcatcacctccaacgccggcgcgctggagcacaagcccgccaccagcacgatc
aactgcaccgtgtcgggcaccatcgaggactcgatggacggcatcctgcagaaggtccac
gaggccggcctgacgctgaaggccggctgcggcatcggctacgagttcagcaccctgcgt
ccgcgcggcgcgttcgtcgccggtgccggcgcgtacacctccggcccgatgtccttcatg
gatatctacgacaagatgtgcttcaccgtgtcgtccgccggcggccgccgcggcgcgcag
atgggcaccttcgacgtgtcgcatccggacgtgaaggacttcatccgcgccaagcgcgag
gacggccgcctgcgccagttcaacctgtcgctgctgatcaccgacggcttcatgcaggcg
gtcaaggacgacgccgactggccgctggtgttcccggtcaaccgcaaggaaaagaacgac
gtcgacttcgacgatccggcgcaggtggtctggcgcgactggccgacccaccgcaactac
atcgtcggcgacgacggcctggtcgcctgcaaggtctacggccacatccgggcccgccac
ctgtgggacatgatcatggtctcgacgtacgactacgccgagccgggcttcatcctgatc
gaccgcgtcaacgagatgaacaacaactggtggtgcgagaacatccgcgcgaccaatccc
tgcgtgaccgccgatacctgggtgcagacctcggccggcccgcgccaggtggcggagctg
ctcggccggccattcgaagcgcgggtggatggcgtcgatcatgccaccaccgcggagggc
tttttccataccgcgaccaagccggtgtttgccctgcagacccgtgagggccatcgcctg
cgcctgaccgccgatcaccgggtgcgccgggtttcgcgcctgacccgctggagcgtggat
accgaatggtgtgccgccggcgatctggttgccggcgaccgggtgctgctcaacgaccac
cgcgacaacgcgcactgggcgggcgatctggacctcgaacaaggctatctgctcggcctg
ctggtcggcgatggcacgctcaagcacgaggccgcggtgctgtcggtgtggtcggctgtc
gcgcaggccaacggcccggccgcgcaggtcggtaccggcacgctggccctgatgcaggaa
gcggaacgctgcgcacgcacgttgccgcaccgcgccgatttcgccggctggtcggccgtg
gcgggacgcggcgaatggcggctgaagtcggccgcgctgcgcgatcttgccaacgacatg
ggcatgacggtcggcgacaagtcgatcacgccggcgctggaacgtgcctccagcgagggt
tatcgcggtttcctgcgtgggctctttgatgccgatggctcggtgcagggcagccaggag
aaaggcatctcggtgcgtctggcccagtccgacctgccgcgtctggaagccgcccaacgg
atgctgctgcgcctgggcgtgccgtcaacgatctaccgtgaccgtcgtccggccggcacg
gcgctgctgcccgacggccgcggtggcagcgccgggtacgccacccgtgcccagcacgaa
ctcgtcatcagtggcgaggcgctggcgcgctatgccgaattgatcggcttcgccgacacc
gacaaggccgctcgcctgacccgcgcactgtcgggctaccgccgcgcactcaatcgcgcg
cgcttcgtggcgaccgtcgacagcgtgaccgccgacggcgtcgaggacgtctacgacgtg
caggtgccgggcatcaacacgttcgacggcaacggcatacacgcacacaactgtggcgag
cagccacttcccgcctacggcgcctgcctgctgggttcggtcaacctgaccaagttcgtg
cgcaatgcgttcaccgaccaggccgagttcgactgggacgagtacaaggaagtcgtgcgt
gtgttcacccgcatgctcgacaacgtggtggaggtcaacggcctgccgctggagaaacag
cgcgaggagatcctgcgcaagcggcgccacggcatgggcttcctcggcctgggctcgacc
gtgaccatgctgaagatgaagtacggctcggccgagtcctgcgagttcaccgagcgcgtc
gcgcgtgagatggccgtcgccggctgggagatgggcctggaactggcgaaggagaagggc
cctgcgccgatcatggatgagaccttcaaggtcgatgccgagatgctgcgcaagcgcccg
gaaatggtcgccgacggctggaagatcggccaggacgtgcccggcaaggtgctgcacgcg
aagtactcgcgttacatgcagcgcgtggccgaagtcgcgcccgaactggtcgccgagctg
accgaggtcggtgcgcgcttcacccaccacagctcgatcgcgccgaccggcaccatctcg
ctgtcgctggccaacaacgcctccaacggcatcgagccgtcgttcgcgcaccactacagc
cgcaacgtgatccgcgagggcaagaagtcgaaggaaaaggtcgacgtgttctcgttcgaa
ctgctcgcctaccgcgcactggtcaaccccgccgcgatgccgttctccgaggaggccgcg
acccgcctgccggactacttcatcgccgccgacgaggtcagcccgaagcagcacgtcgac
gtccaggccgccgcgcagaaatgggtcgacagctcgatctccaagaccgccaacgtcccc
accgactacccgtacgaggacttcaaggacatctacacctacgcccacgcgcagggcctg
aagggctgcaccacgttccgcttcaacccggccgccttccagggtgtgctggtcaaggag
gccgacctggaaaacaccacctaccggttcgagctggaggacggcagcgtggtggaggcc
aagggcaaccaggagatcgaatacgacggcgaaatgcacaccgccgccaacctgttcgat
gccttgaaggaagggtattacggcaagttctga

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