Lysobacter sp. CW239: H2514_02005
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Entry
H2514_02005 CDS
T10688
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
lyw Lysobacter sp. CW239
Pathway
lyw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lyw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H2514_02005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lyw02022
]
H2514_02005
02035 Bacterial motility proteins [BR:
lyw02035
]
H2514_02005
Two-component system [BR:
lyw02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
H2514_02005
Bacterial motility proteins [BR:
lyw02035
]
Pilus system
Twitching motility proteins
H2514_02005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_16
HTH_50
AAA_5
Mg_chelatase
FleQ
Pre_tape_measure
VpsR
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QOD91464
LinkDB
All DBs
Position
complement(478955..480433)
Genome browser
AA seq
492 aa
AA seq
DB search
MAETRSALVVDDERDIRELLVMTLGRMGLRCDTASSLSDARAQLARNRYDLCLTDMRLPD
GSGIDLIAEISQQHPQTPVAMITAFGNVDAAVEALKAGAFDFVAKPVELSVLRDLVRHAL
ELKEKPAVVHSPDTVATRLYGESPAMEQLRQTIAKVARSQAPVYIAGESGVGKELVARTI
HSEGGRATGPFVPVNCGAIPSELMESEFFGHKKGSFTGAHADKPGLFQSADGGTLFLDEV
AELPLAMQVKLLRAIQEKSIKPVGANAEIVVDVRILSATHKNLAAMVADGRFRQDLYYRI
NVIELRVPPLRERLEDLPGLCAKILQRLAADLDRPAPSLSGDAVEALRHYAFPGNVRELE
NILERALALADGDHLDAHDLRLPNHPAIASSHGTPPLSTGPFATTTHHPVPGNSPQPPHT
PQAAAAAAGIDPRTIDPRDTATSALPSYIEEIERAAIQHALQENRYNKTRTAAALGITFR
ALRYKLKKLGID
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggctgagacacgtagtgcattggtggtcgacgacgagcgggacatccgcgaattgctg
gtcatgacccttggccgcatgggcctgcggtgcgataccgcatccagcctgtccgacgcc
cgggcccagctggcacgcaacaggtacgacctgtgcctgaccgacatgcgcctgccggac
ggctcgggcatcgacctgatcgccgaaatcagccagcagcacccccagaccccggtcgcg
atgatcaccgcgttcggcaacgtcgacgccgcggtggaagccctcaaggccggcgcgttc
gacttcgtcgccaagccggtcgagctgtccgtgctgcgcgacctggtccgccatgcgctg
gagctgaaggaaaagcccgccgtcgtccacagcccggacacggtcgccacccgcctgtac
ggcgagtcgcccgcgatggagcagctgcgccagaccatcgccaaggtcgcccgcagccag
gccccggtctatatcgccggcgaatccggcgtgggcaaggaactggtcgcccgcacgatc
cactccgaaggcggccgcgccaccggcccgttcgtgccggtcaactgcggcgcgattcca
tcggagctgatggaaagcgagttcttcggccacaagaagggcagcttcaccggcgcccat
gccgacaagcccggcctgttccagagcgccgacggcggcaccctgttcctggacgaggtc
gccgaactgccgctggcaatgcaggtcaagctgctgcgcgcgatccaggaaaagtcgatc
aagccggtcggcgccaatgccgagatcgtggtcgacgtgcgcatcctgtcggccacccac
aagaacctcgccgcgatggtggccgatggccgcttccggcaggacctctactaccgcatc
aacgtcatcgaactgcgcgtgccgccgctgcgcgagcgtctggaagacctgcccggcctg
tgcgcgaagatcctccagcggctggccgccgacctcgaccgccccgctccgagcctgtcc
ggcgatgcggtcgaggcgctccgccattacgccttcccgggcaacgtgcgcgagctggaa
aacatcctcgagcgcgccctggccctggccgacggcgaccacctcgacgcccacgacctg
cgcctgccgaaccacccggcaattgcctcgtcgcatggcacgccgccgctgagcaccggc
ccgttcgccaccaccacacaccaccccgtacccggcaacagcccacagccgccgcacacc
ccccaggccgctgccgccgcggccggcatcgacccgcgcacgatcgacccgcgcgacacc
gccaccagcgccctgccctcctacatcgaggagatcgagcgcgccgccatccagcacgcc
ctgcaggaaaaccgctacaacaagacccgcaccgccgccgcgctgggcatcaccttccgc
gcgctgcgctacaagctgaagaagctcggaatcgactga
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