Lysobacter sp. CW239: H2514_02910
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Entry
H2514_02910 CDS
T10688
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lyw Lysobacter sp. CW239
Pathway
lyw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lyw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H2514_02910 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyw03021
]
H2514_02910 (rpoA)
03400 DNA repair and recombination proteins [BR:
lyw03400
]
H2514_02910 (rpoA)
Enzymes [BR:
lyw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H2514_02910 (rpoA)
Transcription machinery [BR:
lyw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H2514_02910 (rpoA)
DNA repair and recombination proteins [BR:
lyw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H2514_02910 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QOD91618
LinkDB
All DBs
Position
669459..670457
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTGNRARVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLEVLLNLKDVAVRMHTGESATLSLTKQGPGIVTAADIKTDHN
VEIINGEHVIAHLTKDATLSMRVKIERGYGYQPATARRRPDEETRTIGRLMLDASFSPIR
RVAYSVEAARVEQRTDLDKLILDIETNGTIDAEEAVRTAAEVLSDQLSVFGDFTQRERGA
AKPATSGIDPVLLRPIDDLELTVRSANCLKAESIYYVGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGIASHGMMG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaatcaggtactgcgcccgcgcggtccccagatcgaacgcctcacc
ggcaaccgcgccagggtagtgatcgagccgctggagcgcggttatggccacactctgggc
aacgcgttgcgtcgcgtgctgctgtcgtcgattccgggttttgcgatcaccgaagtcgaa
atcgatggcgtactgcacgaatacaccacggtcgaggggctgcaggaggacgtacttgaa
gtcctgctcaacctcaaggacgttgccgtccgcatgcacaccggcgaatcggcgaccctg
tcgctgaccaagcagggtccgggcatcgtgaccgcggccgacatcaagaccgaccacaac
gtcgagatcatcaacggcgagcacgtgatcgcgcatctgaccaaggatgcgacgctgagc
atgcgcgtcaagatcgaacgcgggtacggctatcagccggccaccgcgcgacgtcgcccg
gacgaggagacccgcaccatcggtcgcctgatgctggacgccagcttcagcccgatccgt
cgggtcgcctattcggtcgaggctgcccgtgtcgagcagcgcaccgacctggacaagctg
atcctcgatatcgagaccaacggcacgatcgatgcggaagaagcggtgcgtactgcggcc
gaagtcctcagcgatcaactgtcggtgttcggtgacttcacccagcgcgagcgtggtgcg
gccaagccggcgaccagcggcatcgatccggtgctgttgcgtccgatcgacgatctggaa
ctgacggtgcgttcggccaactgcctcaaggccgagagcatctactacgtcggcgatctg
atccagaagaccgaagtcgaattgctgaagacgccgaacctcggcaagaagtcgctcacc
gagatcaaggaagtgcttgcccagcgcggcctttccctcggcatgaagctcgaaaattgg
ccgccagcgggtattgcctcgcacggcatgatgggctga
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