KEGG   Lysobacter sp. CW239: H2514_03925
Entry
H2514_03925       CDS       T10688                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
lyw  Lysobacter sp. CW239
Brite
KEGG Orthology (KO) [BR:lyw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lyw03032]
    H2514_03925
   03036 Chromosome and associated proteins [BR:lyw03036]
    H2514_03925
   03400 DNA repair and recombination proteins [BR:lyw03400]
    H2514_03925
DNA replication proteins [BR:lyw03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    H2514_03925
Chromosome and associated proteins [BR:lyw03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    H2514_03925
DNA repair and recombination proteins [BR:lyw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      H2514_03925
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 DUF2267 VWA_3 HU-CCDC81_euk_1 Phage_cement_2
Other DBs
NCBI-ProteinID: QOD91799
UniProt: A0A7L8D0M0
LinkDB
Position
887263..887535
AA seq 90 aa
MNKGDFVAAVAEAAELSKTDAASAVDAVISVITKTLKKGETITLVGFGTFEVRKRAARQG
RNPKTGEAIKIKASKNPAFKAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaagggtgattttgttgctgctgtcgccgaggctgcagagctgtccaagaccgat
gccgccagtgccgtggatgccgtgatcagcgtcatcaccaagacgttgaagaagggcgaa
acgatcacgctggtcggcttcggcaccttcgaggttcgcaagcgtgctgcccgtcagggc
cgcaatccgaagaccggcgaggccatcaagatcaaggcatcgaaaaatccggcgttcaag
gctggcaaagccctgaaggacgctgtaaactaa

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