Lysobacter sp. CW239: H2514_04175
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Entry
H2514_04175 CDS
T10688
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lyw Lysobacter sp. CW239
Pathway
lyw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lyw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
H2514_04175 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyw03019
]
H2514_04175 (rnc)
03009 Ribosome biogenesis [BR:
lyw03009
]
H2514_04175 (rnc)
03036 Chromosome and associated proteins [BR:
lyw03036
]
H2514_04175 (rnc)
Enzymes [BR:
lyw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
H2514_04175 (rnc)
Messenger RNA biogenesis [BR:
lyw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H2514_04175 (rnc)
Ribosome biogenesis [BR:
lyw03009
]
Eukaryotic type
90S particles
RNase
H2514_04175 (rnc)
Prokaryotic type
rRNA processing factors
H2514_04175 (rnc)
Chromosome and associated proteins [BR:
lyw03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
H2514_04175 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QOD91842
LinkDB
All DBs
Position
931444..932103
Genome browser
AA seq
219 aa
AA seq
DB search
MADRIGHVFARPELLAQALTHRSAGAPHNERLEFLGDALVNLFVAEALYRHWPKADEGAL
TRGRAELVRESALAPIARALELGERLTLGPGEMKTGGHRRDSILADALEAVVAAIYLDAD
FHTCRSVVMPWFAAAMEALPPPNKVGKDAKTRLQEWLQGRQKPLPVYELVAEGGEDHAKT
FRVTCTLSQPPLLSEGEGSSRRSAEQAAAEAALAALAGS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccggatcggccacgtgtttgcgcggcccgaattgctggcgcaggcactgacg
caccgcagcgcaggcgctccgcacaacgagcgcctggagttcctgggtgacgcgctggtc
aacctgttcgtcgccgaggcgctgtaccggcattggcccaaggccgatgaaggcgcattg
acccgcggccgcgccgagctggtgcgcgagtccgcgctggcgccgatcgcgcgcgcgctc
gaactgggcgaacgcctgacgctgggcccgggcgagatgaaaaccggcggtcaccggcgc
gactcgatcctcgccgatgcgctggaggcggtggtcgcggcgatctatctggatgcggac
ttccacacctgccgttcggtggtgatgccctggttcgcggcggcgatggaggcgttgccg
ccaccgaacaaggtcggcaaggacgccaagacccgcctgcaggaatggttgcagggccgt
cagaaaccgctgcccgtgtatgaactggtcgccgagggcggcgaggaccacgccaagacc
ttccgggtcacctgcaccctgagccagccgccgctgctgagcgaaggcgagggaagttcg
cgccgcagcgccgagcaggccgccgccgaggccgcgctggcggcgcttgccgggtcctga
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