Lysobacter sp. CW239: H2514_04345
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Entry
H2514_04345 CDS
T10688
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
lyw Lysobacter sp. CW239
Brite
KEGG Orthology (KO) [BR:
lyw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyw03019
]
H2514_04345 (rng)
03009 Ribosome biogenesis [BR:
lyw03009
]
H2514_04345 (rng)
Messenger RNA biogenesis [BR:
lyw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H2514_04345 (rng)
Ribosome biogenesis [BR:
lyw03009
]
Prokaryotic type
rRNA processing factors
H2514_04345 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
CHP02642
Motif
Other DBs
NCBI-ProteinID:
QOD91872
LinkDB
All DBs
Position
970551..972059
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AA seq
502 aa
AA seq
DB search
MSEEILVNVTPRETRVAVVENGMLQELHIERGWARGVVGNIYKGRVQRVMPGMQAAFIEI
GLERAAFLHAADIVKPAVGDGEGDAASLPATPTRPISELLREGQEIVVQVVKDPIGGKGA
RLTTQISIPSRYLVLLPHTRVVGVSARIEDEAERARLKAHVAALAPAGESHGYIVRTNAE
GQSEEALAEDITYLSRVWALIGEKSGSVRVGECVYEDLTLPLRAVRDLIRRDVEKVKVDS
RETFERLRAFAAQFMPSTGTAEGPDLVEKIEHYAGARPIFDLYGVEDEIQRALDKQVPLK
SGGYLVIDQTEAMTTVDINTGSFLGQRNQEETVYRTNLEAAQSVARQLRLRNLGGIIIID
FIDMNDAEHKRQVLRTLEKALLKDHAKTTVYEFSPLGLVEMTRKRTTESLQRQLTEPCHE
CSGRGTLKTPETVTYEIFREIVRQVRQFDAARLLVIASPKVVARITDEESAAVAELEEFV
GKSIRFQPDDQYAQEQFDVVLL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggagatcctggtcaacgtcaccccacgcgagacccgggtggcggtggtcgaa
aacggcatgctgcaggagctgcacatcgagcgcggctgggcgcgcggcgtggtcggcaac
atctacaagggccgggtgcagcgggtgatgccgggcatgcaggcggccttcatcgagatc
gggctggaacgcgcggcgttcctgcatgccgccgatatcgtcaaaccggcggtgggtgac
ggcgagggcgacgcggcgtccttgccggccaccccgacccggccgatctccgagttgctg
cgcgaaggccaggaaatcgtcgtccaggtggtcaaggacccgatcggtggcaagggtgcg
cggctgaccacccagatcagcattccctcgcgttacctggtcctgctgccgcacaccagg
gtggtcggggtttcggcgcggatcgaggacgaggccgagcgcgcccgcctgaaggcgcat
gtcgccgcgctggcaccggccggggagtcccacggctacatcgtgcgcaccaatgcggag
ggccagtcggaagaggcgctggccgaggacatcacctacctcagccgggtgtgggccctg
atcggcgagaagtcggggtccgtgcgggtgggcgagtgcgtgtacgaggacctgaccctg
ccgctgcgcgcggtgcgcgacctgatccggcgcgatgtcgagaaggtcaaggtcgattcg
cgcgagaccttcgagcgcctgcgcgcgttcgcggcgcagttcatgccttccaccggcacc
gccgaagggccggacctggtggagaagatcgagcactacgccggtgcgcggccgatcttc
gacctctacggcgtggaggacgagatccagcgcgcgctggacaagcaggtgccgctgaaa
tccggcggctacctggtgatcgaccagaccgaggcgatgaccacggtcgacatcaatacc
ggctcgttcctgggccagcgcaaccaggaggagaccgtctaccgcaccaacctggaggcg
gcccagtcggtcgcgcgtcagctgcggctgcgcaacctgggcggcatcatcatcatcgac
ttcatcgacatgaacgatgccgagcacaagcgccaggtgctgcggacgctggaaaaggcg
ctgctgaaggaccacgccaagaccacggtgtacgagttctcgccgctggggctggtggag
atgacccgcaaacgcaccaccgaaagcctgcagcgccagctgaccgagccctgccacgaa
tgcagtggtcgcggcacgctgaagacccccgaaacggtgacctacgagatcttccgcgag
atcgtgcgccaggtgcggcagttcgatgcggcgcggttgctggtgatcgcctcgccgaag
gtggtcgcgcggatcaccgacgaggagtcggcggccgtggccgagctggaggagtttgtc
ggcaagtcgatccgtttccagcccgacgaccagtacgcgcaggagcagttcgatgtcgtt
ctgctctga
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