Lysobacter sp. CW239: H2514_07335
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Entry
H2514_07335 CDS
T10688
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lyw Lysobacter sp. CW239
Pathway
lyw03410
Base excision repair
lyw03430
Mismatch repair
lyw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H2514_07335 (recJ)
03430 Mismatch repair
H2514_07335 (recJ)
03440 Homologous recombination
H2514_07335 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyw03400
]
H2514_07335 (recJ)
DNA repair and recombination proteins [BR:
lyw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
H2514_07335 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H2514_07335 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H2514_07335 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QOD90069
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Position
complement(1675359..1677110)
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AA seq
583 aa
AA seq
DB search
MKPIGKLRRRIAAESGPWPTQIPPLLQRIYSARGAMAIEQARPKLANLLSPDTLSGLDAA
TALLADAIADDRHILVVGDFDCDGATACAVAVRGLRMLGARRVSHAVPNRMIHGYGLSPA
LVAELAAMEPGPGSGPGETLLVTVDHGIACHAGIAAAKALGWQVLVTDHHLPGDTLPPAD
AIVDPNQPGDRFPSKVLAGVGVMFYVLLALRRRLRDAGRLDTGVDGKGPDLTRLLDLVAV
GTVADLVPLDANNRALVAAGLRRLRAGQGCPGLRALIEVAQRDPARLSASDIGFAIAPRL
NAAGRLEDMALGIECLLTDDMDQARGIADTLNRINTERRAVQQQMTEEAEAAFAKVVLDA
ASAPLAVCLFDPDWHPGVVGLVASKMKERLHRPAIAFAPAEPGGDMLRGSARSIPGFHIR
DALAMVNARNPGLIERFGGHAMAAGLSLRAASMEAFALAFRDCVAATLGEELLQAEILSD
GELAGNEFTRRSADALRDGGPWGQGFPEPQFDGEFEVLSWRVVGERHLKLELGHGAIRLN
AIEFGGWTGQEPPARVRIAYRLEADDYRGGDAIQLVVVHREAA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccgatcggcaagctccgtcggcgcatcgcggcggaatccggcccgtggcccacc
cagatcccaccgctgctgcaacgcatctacagcgcccgcggcgcgatggccatcgagcag
gcccgcccgaagctggcgaacctgctgtcgcccgacacgctgtccgggctggatgcggca
accgcgctgctggccgacgcgatcgcggacgaccgccacatcctggtggtgggcgatttc
gattgcgatggcgccaccgcctgcgccgtcgcggtgcgtggcctgcggatgctgggcgcc
cgccgcgtctcccacgccgtgcccaaccggatgatccatggctacggcctgtcgccggcg
ctggtggccgagctggcggccatggagcccggccccggatcaggtccgggggagaccctg
ctggtcaccgtcgaccacggtatcgcctgccacgccggcatcgccgccgccaaggcgctg
ggctggcaggtgctggtgaccgaccaccatctgcccggagacacgctcccgccggctgat
gccatcgtcgatcccaaccagcctggcgaccggttcccgagcaaggtgctggccggggtc
ggcgtgatgttctacgtgttgctggcgctgcgccggcggctgcgcgatgccggcaggctc
gataccggtgtggacggaaaaggccccgacctgacccggctgctcgacctggttgcggtc
ggtacggtcgctgatctggtgccgctggatgccaacaaccgcgccctggtggcggccggc
ctgcgccgcctgcgcgcggggcagggctgtcccggcctgcgcgcgctgatcgaggtggcc
cagcgcgatccagcccggctgagcgcgagtgatatcggctttgcgatcgcgccgcgactg
aatgcggccggccggctggaagacatggcgctgggcatcgagtgcctgctgaccgacgac
atggaccaggcgcgcgggatcgccgataccctcaaccggatcaacaccgagcgccgcgcg
gtccagcagcagatgaccgaggaggcggaggctgcgttcgccaaggtggtgctggatgcc
gccagcgcgccgctcgcggtctgcctgttcgatccggactggcacccgggcgtggtcggg
ctggtcgcgtcgaaaatgaaggaacgcctgcaccgcccggcgatcgcgtttgccccggcc
gagccgggcggtgacatgctgcgcggctcggcccggtcgattcccggcttccatatccgc
gacgccctggcgatggtgaatgcgcgcaatcccggcctgatcgaacgctttggcggccat
gcgatggcggccggtctgtcactgcgcgccgcttcgatggaggcctttgcgctggcgttc
cgcgactgcgtcgccgccacgctgggcgaagaactgctgcaggccgagatcctcagcgac
ggcgaactggcgggcaacgagttcacccgtcgcagcgcggacgcattgcgtgatggcggg
ccgtggggacagggcttcccggaaccgcagttcgatggcgaattcgaagtgttgagctgg
cgcgtggtcggtgagcggcatctgaagctcgaactcggccacggcgcgatacgcctgaac
gcgatcgagttcggcggctggacgggacaggaaccgcctgcgcgggtccgaatcgcctac
cggctggaagccgacgactatcgcggcggcgacgcgatccagctggtcgtggtgcaccgc
gaagccgcttga
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