Lysobacter sp. CW239: H2514_07730
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Entry
H2514_07730 CDS
T10688
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
lyw Lysobacter sp. CW239
Brite
KEGG Orthology (KO) [BR:
lyw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lyw03036
]
H2514_07730 (smc)
Chromosome and associated proteins [BR:
lyw03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
H2514_07730 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
SMC_hinge
AAA_29
FKBP15
CCDC39
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QOD90139
LinkDB
All DBs
Position
complement(1764934..1768437)
Genome browser
AA seq
1167 aa
AA seq
DB search
MRLSTIKLSGFKSFVDPTTLHLPTNMTGVVGPNGCGKSNIIDAVRWVMGESSASRLRGDS
LTDVIFAGSSSRKPVSQATVELIFDNSDHTITGEYGAFDEISVKRLVSRDGASQYYLNGA
KCRRRDITDLFLGTGLGPRSYSIIEQGMISQIIEARPEDLRVYLEEAAGISKYKERRKET
ETRIRHTRENLDRLSDLREEVGKQLEHLRRQARQAEQYQAIQAERKVRDAEWKALEHRAL
DRKLQAQREKLAQQETRLQQLIAEQREAEREIETGRVRREEAAEALNKAQAESYEVGGAL
ARIEQQIQHQRELSSRLLKARDEAQSQLAQIAEHIGSDQSRLEVLGAAIEHDEPRLEQLR
EEDLARQDALREAEAALAAWQQRWDEHTRAQSEATRAADVERTRIEHLDRQAMDADRRRE
ALTAERAGLDLASLAEAFAALEEDHEARKLSLDSLTDALESRKAGVDQLQEQQRAAQSAL
ADVRKQAQAARGRLSSLETLQHAALGQEQGAALGWLQARGLDSAARVGEMLVVEDGWENA
VESALGQLIEGVLVESPESLVDAIGELGEGRLALVAAKNDAVDFAPTSLASRVRGPIAIR
RILSQWHGAEDLQAARTLLAGLAAGESVITRNGERLGAGWLRVLRSGAAKQGALLREREI
QSLRNEIETLQAREHELDANLTQLRDRLLAAEQQREDAQRTLYMAHRGVSELAGQLQSQQ
GRLDSARGRIEKIEAELAQLSESLEAAREQGREARNRQEEAVMRMTELEDARHALDNERR
TLGEARDRARTMARESRDAAHALALTLESQRAQVASLTQALDRMGGQRGQLDSRLGELAS
QLAEGDSPVLQLEEQRQVTLEQRVQTEQKLAAARTAVDGIDNDLRRFEQTRQQRDEQALA
QREAIGQRRLEQQAILLKAEALVEAVVEAGFVLDDVVNTLTDEMEPAAWERTVNELDGKL
RRLEPVNLAAIAEHAEASQRKEYLDAQDVDLTTALETLEEAIRKIDRETRGRFKDTFDRV
NAGVQQLYPRLFGGGHAYLELTGEDLLDTGVAIMARPPGKRVSNISLLSGGEKAMTAVAL
VFAIFQLNPAPFCLLDEVDAPLDEANVGRLAAMVSEMSEQVQFLFVSHNKATMEAAQQLA
GVTMREPGVSRLVSVDLAEATRLVGAA
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtccacgatcaagctgtccggcttcaaatccttcgtcgatccgaccaccctg
cacctgccgaccaacatgaccggcgtggtcgggccgaacggttgcggcaagtcgaacatc
atcgacgccgtgcgctgggtgatgggcgaaagctcggccagccgtttgcgtggcgactcg
ctgaccgacgtcatcttcgccggctcctcgtcgcgcaagccggtatcgcaggccaccgtc
gagctgatcttcgacaactccgaccacaccatcaccggcgagtacggcgcgttcgacgag
atctcggtcaagcgcctggtcagccgcgacggcgccagccagtactacctcaatggcgcc
aaatgccgtcggcgcgacatcaccgacctgttcctgggtacgggactggggccgcgcagc
tactcgatcatcgagcagggaatgatcagccagatcatcgaggcccggcccgaggacctg
cgcgtgtacctggaggaggccgccggcatctccaagtacaaggagcgccgcaaggagacc
gagacccgcatccgccacacccgcgagaacctggaccgcttgagcgacctgcgcgaggag
gtcggcaagcaactcgaacacctgcgccggcaggcccgccaggccgagcagtaccaggcc
atccaggccgaacggaaggtcagggatgccgagtggaaggcgctggagcaccgcgccctg
gaccgcaagctgcaggcccagcgcgagaagctggcccagcaggaaacccgcctgcagcag
ttgatcgccgagcagcgcgaggccgagcgcgagatcgagaccggccgcgtgcgccgcgag
gaagccgccgaggcgctgaacaaggcgcaggccgagagctacgaggtcggcggcgcgctg
gcccggatcgagcagcagatccagcaccagcgcgaattgtcctcgcgcctgctgaaggcg
cgcgacgaggcgcagagccagctggcacagatcgccgaacacatcggcagcgaccagtcg
cggctggaggtgctcggcgcggcgatcgagcacgacgagccgcggctggaacagttgcgt
gaggaggacctcgcccgccaggacgccctgcgcgaggccgaggccgcattggccgcctgg
cagcagcgctgggacgaacacacccgcgcgcagtccgaagccacccgcgcggcggacgtc
gagcgcacccgcatcgagcatctcgaccgccaggcgatggatgccgaccgccgccgcgag
gcattgaccgccgagcgcgccggcctcgacctggcctcgctggccgaggcgttcgcggcg
ctggaggaggatcacgaagcccgcaagctgtcgctggacagcctcaccgacgcgctggaa
agccggaaagccggcgtcgaccagttgcaggagcagcaacgcgccgcccaatccgcgctg
gccgatgtgcgcaagcaggcacaggccgcacgcggccggttgtcgtcgctggaaaccctg
cagcacgccgcgctgggccaggagcagggtgcggcgttgggctggctgcaggcgcgcggg
ctggattcggctgcgcgcgtcggcgaaatgctggtggtcgaggacggctgggaaaacgcg
gtggagagcgcgctgggccagctgatcgaaggcgtgctggtggagtcgccggaaagtctg
gtcgatgcgatcggtgaactcggcgaaggccggttggcgctggtcgcggcaaaaaacgac
gcggtcgatttcgcgccgacctcgcttgcgtcgcgagtacgcgggccgatcgcgatccgg
cggatcctgtcccagtggcatggcgccgaggatctgcaggccgcgcgtacgctgctggcc
ggccttgccgctggcgagtcggtgatcacccgaaacggcgaacgtctcggtgccggctgg
ctgcgcgtgttgcgctcgggcgcggccaaacagggcgccttgctgcgcgagcgcgagatc
cagtcgctgcgcaacgagatcgaaaccctgcaggcacgcgagcacgaactcgacgccaac
ctgacccagctgcgcgatcgcctgctggcggccgagcagcagcgcgaggacgcccagcgc
accctgtacatggcccaccgcggcgtctccgagctggccggccagctgcagagccagcag
ggccggctggattcggcgcgtggccggatcgagaagatcgaggcggaactggcacagctg
tccgaatcgctggaagcggcccgcgagcagggtcgcgaggcgcgcaaccgccaggaagaa
gcggtcatgcgcatgaccgagctggaggacgcccgccacgcgctcgacaacgaacgccgc
accctcggcgaagcccgcgaccgcgcccgcaccatggcccgcgagtcccgcgacgccgcc
catgcgctcgcgctcacgctggaatcccagcgcgcccaagtcgcctcgctgacccaggcg
ctggaccggatgggcggtcagcgcggccagctcgactcgcgcctgggtgaactggccagc
cagttggccgagggcgacagcccggtgctgcaactggaagagcagcgccaggtcacgctg
gaacaacgcgtgcagaccgagcagaaactcgctgccgcgcgcaccgcggtggacggcatc
gacaacgacctgcgccggttcgagcagacccgccagcagcgcgacgagcaggcgctcgcc
cagcgcgaggcgatcggccaacgccggctggagcagcaggcgatcctgctcaaggccgag
gcgctcgtcgaggcagtggtcgaggccggcttcgtgttggacgacgtcgtcaacacgctg
accgacgagatggaaccggcggcgtgggagcggaccgtcaacgagctggacggcaagctg
cggcggctggagccggtcaacctggcggcgatcgccgaacacgccgaagccagccagcgc
aaggagtatctggacgcgcaggacgtcgacctgaccaccgcgctggagaccctggaggaa
gcgatccgcaagatcgaccgcgagacccgaggccgcttcaaggacaccttcgaccgcgtc
aatgccggcgtgcaacagctgtatccgcgcctgttcggcggcggccacgcctatctggaa
ctcaccggcgaggacctgctggacaccggcgtggcgatcatggcgcgcccgcccggcaag
cgggtgtcgaacatctcgctgctgtcgggcggtgagaaggcgatgaccgcggtggcgctg
gtgttcgcgatcttccagctcaatccggcgccgttctgcctgctcgacgaggtcgatgcg
ccgctggacgaggccaacgtcggccggctcgcggcgatggtcagcgagatgagcgagcag
gtacagttcctgtttgtcagccacaacaaggcgacgatggaagccgcgcagcaattggcc
ggcgtcaccatgcgcgagccgggcgtcagccgcctggtgtcggtcgacctggccgaggcc
acccgtctggtcggtgccgcgtga
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