Lysobacter sp. CW239: H2514_07855
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Entry
H2514_07855 CDS
T10688
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lyw Lysobacter sp. CW239
Pathway
lyw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H2514_07855 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyw03400
]
H2514_07855 (recD)
Enzymes [BR:
lyw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H2514_07855 (recD)
DNA repair and recombination proteins [BR:
lyw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H2514_07855 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
AAA_22
Helicase_RecD
UvrD-helicase
SLFN-g3_helicase
AAA_16
AAA_5
AAA_7
RecD_N
AAA_28
Herpes_Helicase
nSTAND3
AAA_24
DEAD
Mg_chelatase
T2SSE
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QOD90160
UniProt:
A0A7L8CTH0
LinkDB
All DBs
Position
complement(1797450..1799333)
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AA seq
627 aa
AA seq
DB search
MSYGFDALPAGSFAEAWRPLERALYRWVIGHQGSTLLARVAAWASLADGRGDTALWLSGG
VESGSEMPALNEAEIAALAAEPMVGSPDTDAATPVPFVLDADGRFYLWRNYRHEVAVADA
VMRRRDQADAVTVAEDDIDTLFHGIDDNTVAQQRLAVRRVAGRKLFVLTGGPGTGKTTTV
LRMLLMLQRPSSRPLTIQVAAPTGKAAQRLVQSLREGKQKLRRHADKPLPADWLPLLENV
PDHEALTLHRLLGYRPYDNVFARDAKDPIPADIVVVDEASMVDLAMLRGLLDAVRPDATL
ILVGDADQLTSVAAGSVLMDLVTAMDPAAGEGGDEERAGDATDTDDLVKLRHSFRAEQYL
VDINQAINAGDAGALQLAMAAAAEHARHIAIDTPQELGRQVERWSKRIAKTDELRASSDG
VTDASGKGPVEAALDALARRQLLCAMREGPYGATAVNQAIEHRLRKEWDEEPGREWYPGR
AVIIVRNDYTAGLFNGDVGICLADADGHLRVWFEGSPESVAGDDAQPARRFRSFAPNALP
PHESAFAITIHKSQGSEYAHVAVLLPPDAESRILSRQLLYTGVSRAKRSVELWAGDAALA
TAVTHSVQRQGGVAAKLAQRNDGGRSP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagctacggttttgacgcgctgccagccgggtcgtttgccgaagcctggcgcccgctg
gaacgcgccttgtaccgctgggtgatcggccatcaaggctcgacgctgctggccagggtg
gccgcctgggcgagcctggccgacggccgcggcgacaccgccctgtggctgtccggcggt
gtcgaaagcggcagcgaaatgccggcgttgaacgaggccgagattgccgcgctggccgcc
gaaccgatggtcggcagcccggacaccgatgccgcgaccccggttccgttcgtgctggat
gccgacggtcggttctacctgtggcgcaattaccggcacgaagtcgcggtggccgatgcg
gtcatgcgacggcgtgatcaggccgatgccgtcaccgtcgccgaagacgatatcgacacc
ttgttccacggcatcgacgacaacacggtcgcgcagcaacggctcgcggtccgccgcgtc
gccgggcgcaagttgttcgtgctgaccggcgggccgggcaccggcaagaccaccaccgtg
ctgcgcatgttgctgatgctgcaacgtccgtcgtcccggccgctgacgatccaggtggcc
gcgccgaccggcaaggccgcccagcggctggtgcagtccctgcgcgagggcaagcagaag
ctgcgtcggcacgccgacaaacccctgcctgcggactggctcccgctgctggaaaacgtg
cccgaccatgaagcgctcaccctgcatcgcctgctcgggtaccggccgtacgacaacgta
ttcgcgcgcgatgcgaaggatccgattcccgccgatatcgtggtcgtcgacgaggcctcc
atggtcgacctggccatgctgcgcggcctgctcgacgccgtccgacccgatgccaccctg
atcctggtcggcgatgccgaccagctgacctcggtcgcggccggttcggtgctgatggac
ctggtcaccgccatggatcctgctgccggggaaggtggtgatgaggagcgtgccggcgac
gcaacggacaccgacgatctggtgaagctgcgtcacagcttccgcgccgagcagtatctg
gtggacatcaaccaggccatcaacgccggggatgccggagcgctgcagctggcgatggcc
gccgccgcggaacatgcaaggcacatcgccatcgacaccccgcaggaactcggccggcag
gtcgagcgctggtcgaagcggatcgcaaagaccgacgagctgcgcgcctccagcgacggt
gtcaccgacgccagcggcaagggtccggtggaggccgccctggacgcgctcgcccggcgc
cagttgctgtgcgccatgcgcgaaggcccgtacggcgcgacggcggtcaaccaggccatc
gaacaccgcctgcgcaaggagtgggacgaagagcccggccgcgagtggtaccccggccgc
gccgtgatcatcgtccgcaacgactacaccgccggcctgttcaacggcgacgtcggcatc
tgcctggccgacgcggacggacacctgcgggtctggtttgaaggcagccccgaatccgtc
gccggcgatgacgcgcagccggcccgacgcttccgcagcttcgctcccaatgcactgccg
ccgcacgagagtgctttcgcgatcaccatccacaagagccagggctccgaatacgcccac
gtcgccgtgctgctgccacccgacgccgaaagccggatcctgtcgcgccaactgctctac
accggcgtgtcccgcgcaaagaggtcggtcgagctgtgggcgggcgatgccgcactggcc
acggcggtcacacacagcgtccagcggcagggtggggtggcggcgaagctggcgcagcgt
aacgacggggggaggtcgccgtga
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