Lysobacter sp. CW239: H2514_07860
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Entry
H2514_07860 CDS
T10688
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
lyw Lysobacter sp. CW239
Pathway
lyw03440
Homologous recombination
Brite
Enzymes [BR:
lyw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H2514_07860
DNA repair and recombination proteins [BR:
lyw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H2514_07860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QOD90161
UniProt:
A0A7L8CTU0
LinkDB
All DBs
Position
complement(1799330..1803073)
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AA seq
1247 aa
AA seq
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MSAVVSMEHPTQHPTQHQTQHPTEQLQPDSWRNLPLEAGGRSLIEASAGTGKTWTISVLY
LRLLLEQGLSPKQIVVTTFTDSAAGELRERIRARLIEAERYGRSLLDNGLQADDSDPVDR
QWLYGHWTGTADGAAARERIQHDIQRLRLAQAELDLAPIGTLHGLCRKILVDYPFESGSA
FGLGELVSSESMLQTLAEDVWRQQTQAPDSGLPVLDVDSIGKLKQYLKAYSAPGVSVRLR
ALTEAPEVVLSSDWVDPIRQLVGRKIFQPRKTALKNALTHLADFLESQPRDPDLIPKTLA
NLTPEPVSDQIADDHLDDPDIQKVLAFAADAAEALKPLAIHQKDQAQWPNHEARFAAWQH
WVEQIKTWRHHRLTASGQVTFDELIERVARALPAGGSVLAERLFAAWPVALVDEFQDTDA
LQYGILDRIYRASDGGQRGRLVMIGDPKQAIYRFRGGDIHAYLKARRDAGSHLSLDTNYR
SSREMVAACNAFYDLAGAQLSTDDSHEIRYEPVNASARCDDAPYEVDGRLCTRPLQLHYW
PDCPDDADSRRSAALEGCANQIVELLTPGRHSIGGNPLVPGDIAVLLPANGDITRLRRLL
SARNVPCVSSVRSSVFESDWARELQIVLYAAQHPRDEGAVQAALATRLGGKTYADLLALR
DRPEHWQALSDDYAALGDIWRTRGVLALVQEVTRQATPRLFASGDSERSLTDLRHLGELL
QTASERFAGPEQLLGWLAEERARRKADDGDAADEMQLRIESDAARVRLMTVHASKGLEFP
VVMLPLMWANTQNTNDTIEILHDAQSGERLPGCGDADRARYRQEGQDERFRLLYVAMTRA
RYACHIYVLPPGRAKDKKGGAANTDPHRAPLDAMIERLLPGFDEAAPPSSLHGHIAWNRN
DWLWPERVYQPPLQAGPVIRQALPEPRNTPFEFKWSFTSLTRSRFAHGTTEDGPASDEAG
GAEEADLAGAFTEVPRESATNLETDETPHRELLELAPVGGADFGNALHAMFEFRQVGQPM
SAQHELIRHHLLDSGVRLGDIDVELLVKRLARRIQTTLDTPMELADGHTVRLGELPKEHL
RAEMGFDYALDGVAVQRLREACADAGEPDLIPRSPRHHLRGIMNGKIDLVFQHDRRFYVL
DYKGNQLGKDGLLSMYAPAQLRQAMDASHYRFQALLYVVAVDRYLRQRIGPAYDRSTQLG
EAIYLFVRAVGVAPTQVPGAGIWAHRFSDELIDAVDAVLANRIQEAA
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgtcgtatcaatggaacaccccacccaacacccgacccagcaccagacccaa
cacccgacggaacagctgcagccggacagctggcgcaacctgccattggaggccggcggc
cgcagcctgatcgaggccagcgccggcaccggcaagacctggacgatctcggtgctgtac
ctgcgtctgctgctggagcagggcttgtcgccgaaacagatcgtggtgacgacgttcacc
gactcggcggcgggggagttgcgcgagcgcatccgtgcccgtctgatcgaggccgagcgg
tacggccgcagcctgctggacaacggcctgcaagcggacgacagcgacccggtggatcgg
caatggctgtacgggcactggaccggcacggccgatggcgccgcggcccgggaacgcatc
cagcacgacatccagcgcctgcgcctggcccaggccgagctcgacctcgcgcccatcggt
actctgcacggcttgtgccggaagatcctcgtcgactacccgttcgagagcggcagcgcc
tttggcctgggcgagctggtgtcgtcggaaagcatgctgcagacgctcgccgaggacgtg
tggcggcagcagacccaggcgccggattcgggcctgccggtgctggatgtcgattcgatc
ggcaagctgaaacagtacctcaaggcgtattcggccccgggcgtgtcggtgcggctgcgg
gcgttgacggaggcgccggaggttgttctgtcgtcggactgggtcgatccgatccggcaa
ctggtgggcaggaagatattccagccaagaaaaacagcgctcaaaaacgcgctgacccac
ctggccgatttcctcgaatcgcagccgcgtgacccagacctgataccgaagacgctggcc
aacctcacgcccgagccggtatcggatcagatcgccgacgaccatctcgatgatcccgac
atccagaaggtcctcgccttcgcagcagacgctgccgaggcactgaagccgctggcgatc
catcagaaagaccaggcgcaatggccgaatcacgaagccagattcgccgcctggcagcac
tgggtcgagcagatcaagacctggcgtcaccaccgcctgaccgccagcggccaggtcacc
ttcgacgagttgatcgaacgggtcgcccgcgccttgcccgctggcggaagtgtcctggcc
gagcgcctgttcgcggcctggccggtggcgctggtcgacgagttccaggacaccgatgcc
ctgcagtacggcatcctcgaccggatctaccgcgcgtccgacggtggccagcgcggccgg
ctggtgatgatcggcgatccgaagcaggcgatctaccgcttccgtggcggcgacatccac
gcctacctcaaggcccgccgcgatgccggcagccacctgagcctggacaccaactaccgc
tcctcgcgcgagatggtggccgcctgcaatgcgttctacgacctggccggcgcccagctg
agcaccgatgacagccatgagatccgctacgagccggtcaacgccagtgcccgttgcgac
gacgcgccgtacgaagtggacgggcggctctgcacccgacccctgcagctgcattactgg
cccgattgcccggacgacgccgacagtcgtcgcagcgccgcgctggaaggttgcgccaac
cagatcgtcgaactgctgacgccgggccggcactctatcgggggcaacccgctggtgccg
ggtgatatcgccgtgctgctgccggccaacggcgacatcacccgtttacggcggctgttg
agcgcgcgcaacgtgccttgcgtgtcctcggtccgcagcagcgtgttcgagtccgactgg
gcgcgcgaactgcagatcgtgctgtacgccgcccaacacccgcgcgatgaaggcgcggtg
caggcggccctggcgacgcggctgggcggcaagacctacgcggacctgctggcacttcgt
gaccgccccgagcactggcaggcgctgtccgacgactacgcagcgctgggtgacatctgg
cgcacccgcggcgtcctggcgctggtgcaggaggtgacgcggcaggccacgccgcgtctg
tttgcttccggcgacagcgagcgctccctgaccgacctgcgccatctgggtgaattgctg
cagaccgccagcgagaggtttgccggcccggagcaactgctgggctggctggccgaagag
cgcgcccgccgcaaggccgatgacggcgacgccgcggacgagatgcagctgcgcatcgaa
tccgacgccgcccgcgtgcggctgatgaccgtgcacgcgagcaagggactggagttcccg
gtggtgatgctgccgctgatgtgggcgaacacccagaacacgaatgacacgatcgagatc
ctgcacgacgcgcaaagcggcgagcgcctgccgggctgtggtgacgccgaccgggcgcgc
taccgccaggagggccaggacgagcgcttccgcctgctgtacgtcgccatgacgcgcgcc
cggtatgcctgccacatctatgtattgccgcccggccgtgcgaaggacaagaagggcggg
gcggccaatacggacccgcaccgcgcaccactggacgcgatgatcgagcgcctgttgccg
ggcttcgacgaagccgcgccgccgtcgtccctgcatggacatatcgcctggaaccgcaac
gactggctgtggcccgagcgcgtgtaccagccgccgctgcaagccgggccggtcatccgc
caggccctgcccgaaccccgcaacaccccgttcgagttcaagtggagtttcaccagcctg
acccggtcgcggttcgcgcacggtacgaccgaggacggcccggccagcgatgaagcaggc
ggtgccgaagaagcggacctggcgggcgcgttcacggaggttccccgcgagtcagcgaca
aacctggaaaccgatgaaaccccccaccgcgaactgctcgaactcgccccggtcggcggg
gccgacttcggcaacgcgctgcacgcgatgttcgagttccgccaggtcggccagccgatg
tcggcgcagcacgaactgatccgccaccacctgctcgacagcggcgtgcggctgggcgac
atcgacgtggagctgctggtcaagcggctggcgcgccgcatccagaccacgctggacacg
ccgatggagctggcggacggccacaccgtccggctgggtgagctgcccaaagaacacctg
cgcgcggaaatgggtttcgactacgcgctggacggcgtggcagtgcagcgcctgcgtgag
gcctgcgccgatgccggcgagcccgacctgataccccgaagcccgcgtcatcacttgcgc
gggatcatgaacgggaaaatcgacctcgtgttccagcacgaccggcgcttctacgtgctc
gactacaagggcaaccagttgggcaaggacggcctgctgtcgatgtacgcgcccgcgcaa
ctgcggcaggcgatggacgccagccattaccgcttccaggcactgctgtacgtggtcgcg
gtcgatcgctacctgcgccagcgcatcggcccggcctacgaccgcagcacacagctgggc
gaggcgatctacctgttcgtgcgggcggtcggcgtggccccgacccaggtgcccggcgcc
gggatctgggcgcaccgtttcagcgacgagctgatcgacgcggtcgatgccgtcctcgcc
aaccgcatacaggaggccgcatga
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