Lysobacter sp. CW239: H2514_09280
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Entry
H2514_09280 CDS
T10688
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lyw Lysobacter sp. CW239
Pathway
lyw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lyw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H2514_09280 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyw03400
]
H2514_09280 (uvrB)
DNA repair and recombination proteins [BR:
lyw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H2514_09280 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H2514_09280 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_22
AAA_30
DUF87
CbtA_toxin
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QOD90405
LinkDB
All DBs
Position
complement(2106936..2109026)
Genome browser
AA seq
696 aa
AA seq
DB search
MNDESQIPASTTDALPGDRFPGARQREGVFELVSPYSPAGDQPQAIEKLVAGFEAGLAHQ
TLLGVTGSGKTYTIANVIQQVQKPTLVMAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDY
YQPEAYVASSDTFIEKDSSVNEHIEQMRLSATKALLERRDTIIVCTVSAIYGLGDPNEYF
RMVLHMVRGERINQRELIRRLTEMQYVRNDTELRRGTYRVRGEVIDVHPAESEMEAVRIE
LFDGEIENVTAFDPLTGETLRKLQRYTIYPKSHYVTTRRTVLDAVDAIKDELKIRLEQLY
AQNKLVEAQRLAQRTQFDLEMLAEVGYCNGVENYSRHLTGHMPGEPPPCLFDYLPPDALL
VLDESHVTVPQIGAMYKGDRSRKETLVEFGFRLPSALDNRPLRFEEWEGRSPRSIFVSAT
PRDYELEKSEGQVVELVVRPTGLIDPEVEIRPVATQVDDVMGEITKRVAMGDRVLITTLT
KRMSENLTEYLAEHGVRVRYLHSDIDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEV
SLVAILDADKEGFLRSTGSLIQTIGRAARNVRGKAILYADKVTNSMQRAIEETDRRRAKQ
VEYNAEHGITPVSVVRDVVDIMEGARVDPDALKGRNRARQVAEEMAEYAALSPSQLSARI
KKLEQKMYQHARDLEFEQAAAARDQLHRLKEQGFGA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgaaagccagattcctgcatcaacgacggatgcgctccccggcgaccggttc
cccggtgcgcgccagcgagagggcgtgttcgaactggtctcgccgtactcgccggcgggc
gatcagccgcaggcgatcgagaagctggtggccggtttcgaggccggcctggcgcaccag
acgctgctgggcgtgaccggatcgggcaagacctacacgatcgccaacgtgatccagcag
gtgcagaagccgaccctggtgatggcgcccaacaagaccctggcggcgcagttgtacggc
gagttcaaggcgttcttcccgcacaacgcggtcgagtatttcgtcagctactacgactac
taccagcccgaggcctacgtggcgtcgtcggacaccttcatcgagaaggacagctcggtg
aacgagcacatcgagcagatgcggctgtcggcgaccaaggcgctgctggagcggcgcgac
acgatcatcgtgtgcacggtgtcggcgatctacgggctgggcgatccgaacgagtacttc
cggatggtgctgcacatggtgcgcggcgagcgcatcaaccagcgcgagctgatccgccgc
ctgactgaaatgcagtacgtgcgcaacgacaccgagctgcggcgcggcacctaccgcgtg
cgcggcgaggtgatcgacgtgcacccggcggagtcggaaatggaggcggtgcggatcgag
ctgttcgatggcgagatcgagaacgtcaccgcgttcgacccgctcaccggcgagaccctg
cgcaagctgcagcgctacacgatctaccccaagtcgcactacgtcaccacgcggcgcacg
gtgctggacgcggtggatgcgatcaaggacgagctcaagatccggctggagcagctgtac
gcgcagaacaagctggtggaggcgcagcggctcgcccagcgcacccagttcgacctggag
atgctggccgaagtcggctactgcaacggcgtggagaactactcccgccacctgaccggc
cacatgcccggcgagccgccgccgtgcctgttcgactacctgccgccggacgcgctgctg
gtgctggacgaatcgcacgtgacggttccgcagatcggcgcgatgtacaagggcgaccgc
tcgcgcaaggagaccctggtcgagttcggcttccgcctgccatcggcgctggacaaccga
ccgttgcggttcgaggagtgggaagggcgctcgccgcggtcgatctttgtctcggccacg
ccgcgcgattacgagctggaaaagtccgaaggccaggtggtcgaactggtggtgcgcccg
accggcctgatcgacccggaggtcgagatccgcccggtcgcgacccaggtcgatgacgtg
atgggcgagatcaccaagcgcgtggcgatgggcgaccgggtgctgatcaccaccctgacc
aagcgcatgtccgagaacctgaccgaatacctcgccgaacacggcgtgcgggtgcgctac
ctgcactcggacatcgacacggtcgagcgggtggagatcatccgcgacctgcggctgggc
aagttcgacgtgctggtcggcatcaacctgctgcgcgagggactggacatgccggaggtg
tcgctggtggcgatcctcgatgcggacaaggaaggcttcctgcgttctaccggctcgctg
atccagaccattgggcgggcggcccgcaacgtgcgcggcaaggcgatcctgtatgccgac
aaggtcaccaactcgatgcagcgcgcgatcgaggaaaccgaccgccgccgtgccaagcag
gtcgagtacaacgccgagcacggcatcaccccggtgtccgtagtgcgcgacgtggtcgac
atcatggaaggcgcgcgggtcgacccggacgcgctcaagggccgcaaccgcgcccgccag
gtggccgaggagatggccgaatacgccgcgctcagtccctcgcagctgtcggcacggatc
aagaagctggagcagaagatgtaccagcacgcccgcgacctggagttcgagcaggccgcg
gctgcgcgcgatcagctgcatcggctgaaagaacaggggtttggcgcgtag
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