KEGG   Lysobacter sp. CW239: H2514_11910
Entry
H2514_11910       CDS       T10688                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
lyw  Lysobacter sp. CW239
Pathway
lyw03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:lyw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    H2514_11910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lyw03400]
    H2514_11910
DNA repair and recombination proteins [BR:lyw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     H2514_11910
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QOD90862
LinkDB
Position
complement(2701385..2702419)
AA seq 344 aa
MARPIWSGTLSFGLLNIPVSLMSGERRTDISFRMLDARDNTPIRYERVNADSGEEVAWKD
IVKAFEYDKGSYVVLEPEDIRSAAPESHDAIEVEAFVQASQIDPRYFEKPYVLVPAKKAE
KGYVLLREALSATGRIGIARVVIRTREHLCAVMPHGDALLLLMMRYPQELVDIDEYRIPE
GKGADYRITAREQAFSEQLIETMSGDWDPTQYQDEFRERLQQVIRRRMKDKGVVRREDEE
PELHENAATNVVDFMSLLQQSIARKRRTPAQASATGSDAPQSDGPAKKAAKKVTAKPAPK
ASTKAAKAAAEKAAGAASKRASRSDSSPAKPARKAVTKKRGKVA
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggcccgcccgatctggtccggaaccttgtcattcggtctgctcaacatcccggtgtcg
ctgatgtcgggcgaacgtcgcaccgacatctcgttccgcatgctcgacgcgcgcgacaac
acgccgatccgctacgagcgggtcaacgcggacagcggcgaggaggtggcctggaaggac
atcgtcaaggcgttcgagtacgacaagggcagctacgtcgtgctcgagcccgaggacatc
aggtccgccgccccggaaagccatgacgccatcgaggtggaagccttcgtccaggccagc
cagatcgacccgcgctatttcgagaagccctacgtgctggtgcccgccaagaaggccgaa
aagggctacgtgctgctgcgcgaggcgctgtcggccaccggccggatcggcattgcgcgg
gtggtgatccgcacccgtgagcacctgtgcgcggtgatgccgcacggcgatgcgctgctg
ttgctgatgatgcgttacccgcaggaactggtggacatcgacgagtaccggatccccgaa
ggcaagggcgccgattaccggatcaccgcccgggagcaggcgttctccgagcagttgatc
gagaccatgtccggcgattgggatccgacccagtaccaggacgaattccgcgaacgcctg
cagcaggtgatccgccggcggatgaaggacaagggcgtggtcaggcgcgaggacgaggag
ccggagctgcacgagaacgcggcgaccaatgtggtcgatttcatgtcgttgctgcagcag
agcatcgccaggaagcggcgcacgccggcccaggcatctgcgaccggttcggatgccccg
cagtccgatggcccggcgaagaaggccgcgaaaaaagtcacggcaaaaccggcgccgaag
gccagcacgaaagccgcgaaggccgctgccgaaaaggcggccggcgcggcttccaaacgc
gcctccaggagcgattccagcccggccaagccggcgcgcaaagcggtcacgaagaagcgc
ggcaaagtcgcctag

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