Lysobacter sp. CW239: H2514_11910
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Entry
H2514_11910 CDS
T10688
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
lyw Lysobacter sp. CW239
Pathway
lyw03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lyw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H2514_11910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyw03400
]
H2514_11910
DNA repair and recombination proteins [BR:
lyw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H2514_11910
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QOD90862
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Position
complement(2701385..2702419)
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AA seq
344 aa
AA seq
DB search
MARPIWSGTLSFGLLNIPVSLMSGERRTDISFRMLDARDNTPIRYERVNADSGEEVAWKD
IVKAFEYDKGSYVVLEPEDIRSAAPESHDAIEVEAFVQASQIDPRYFEKPYVLVPAKKAE
KGYVLLREALSATGRIGIARVVIRTREHLCAVMPHGDALLLLMMRYPQELVDIDEYRIPE
GKGADYRITAREQAFSEQLIETMSGDWDPTQYQDEFRERLQQVIRRRMKDKGVVRREDEE
PELHENAATNVVDFMSLLQQSIARKRRTPAQASATGSDAPQSDGPAKKAAKKVTAKPAPK
ASTKAAKAAAEKAAGAASKRASRSDSSPAKPARKAVTKKRGKVA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcccgatctggtccggaaccttgtcattcggtctgctcaacatcccggtgtcg
ctgatgtcgggcgaacgtcgcaccgacatctcgttccgcatgctcgacgcgcgcgacaac
acgccgatccgctacgagcgggtcaacgcggacagcggcgaggaggtggcctggaaggac
atcgtcaaggcgttcgagtacgacaagggcagctacgtcgtgctcgagcccgaggacatc
aggtccgccgccccggaaagccatgacgccatcgaggtggaagccttcgtccaggccagc
cagatcgacccgcgctatttcgagaagccctacgtgctggtgcccgccaagaaggccgaa
aagggctacgtgctgctgcgcgaggcgctgtcggccaccggccggatcggcattgcgcgg
gtggtgatccgcacccgtgagcacctgtgcgcggtgatgccgcacggcgatgcgctgctg
ttgctgatgatgcgttacccgcaggaactggtggacatcgacgagtaccggatccccgaa
ggcaagggcgccgattaccggatcaccgcccgggagcaggcgttctccgagcagttgatc
gagaccatgtccggcgattgggatccgacccagtaccaggacgaattccgcgaacgcctg
cagcaggtgatccgccggcggatgaaggacaagggcgtggtcaggcgcgaggacgaggag
ccggagctgcacgagaacgcggcgaccaatgtggtcgatttcatgtcgttgctgcagcag
agcatcgccaggaagcggcgcacgccggcccaggcatctgcgaccggttcggatgccccg
cagtccgatggcccggcgaagaaggccgcgaaaaaagtcacggcaaaaccggcgccgaag
gccagcacgaaagccgcgaaggccgctgccgaaaaggcggccggcgcggcttccaaacgc
gcctccaggagcgattccagcccggccaagccggcgcgcaaagcggtcacgaagaagcgc
ggcaaagtcgcctag
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