Lysobacter sp. CW239: H2514_13180
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Entry
H2514_13180 CDS
T10688
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lyw Lysobacter sp. CW239
Brite
KEGG Orthology (KO) [BR:
lyw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyw03032
]
H2514_13180
03400 DNA repair and recombination proteins [BR:
lyw03400
]
H2514_13180
Enzymes [BR:
lyw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H2514_13180
DNA replication proteins [BR:
lyw03032
]
Prokaryotic type
DNA Topoisomerases
H2514_13180
DNA repair and recombination proteins [BR:
lyw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H2514_13180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QOD91086
UniProt:
A0A7L8CW51
LinkDB
All DBs
Position
complement(2997035..2998162)
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AA seq
375 aa
AA seq
DB search
MTSQPAKPSADAIQVVRQAGLRYVCDDQAGMARRRVGQHFQYFEPDGRRVRDPATLKRIQ
ALAIPPAWTQVWICRQRNGHLQATGRDARGRKQYRYHPDWQRLRGDGKFDRIVAFGTALP
GLRRRLRSDLGQPGFPRDKVLAIVVALLADTLVRIGNDRYARDNRSFGLTTLRNRHIAFL
RGGRVRLRFRGKGGQEHDIALDDVRLARLVQRCQQLPGQALFQYRDDDGMVRPVDSGEVN
DYLHRTMGEAFSAKDFRTWGGTLAAFRELAGTPLPEPDSAGGDGDDGSGSEPSERALTQT
RNAVIRQVAAELGNTPAVCRKAYIDPVVFEGWRDGRLQRLAANARGARQWEQAALKFLKA
AHRGTGKRGGPSGQR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccagcccgccaagccatcggccgacgccatccaggtggtacggcaggccggc
ctgcgctacgtctgcgacgaccaggccggcatggcccggcggcgggttggccagcacttc
cagtatttcgagccggatggccggcgtgtccgcgacccggccaccctcaagcgcatccag
gcgctggcgatcccgcccgcgtggacgcaggtgtggatctgccgccagcgcaacggccac
ctgcaagccaccggccgcgacgcgcgcggacgcaagcaataccgctaccaccctgactgg
cagcggctgcgcggcgacggcaagttcgaccgcatcgtcgcgttcggcaccgcgctgccg
ggcctgcgccggcgcttgcggagcgacctcggccagcccggctttccgcgcgacaaggtg
ctcgcgatcgtggtcgcgctgctggccgacacgctggtgcgtatcggcaacgaccgctac
gcacgcgacaaccgctccttcgggctgacgaccctgcgcaaccgccacatcgccttcctg
cggggtggccgggtgcggctgcgcttccgcggcaagggcggccaggagcacgacatcgcg
ctcgacgatgtccgcctggccagactggtgcagcgctgccagcaactacccgggcaggcg
ttgttccagtaccgcgacgatgacggcatggtgcggccggtggattcgggcgaggtcaac
gactacctgcaccggaccatgggcgaggcgttcagcgccaaggatttccggacctggggc
ggcacgctggccgcgtttcgcgaactggcgggcaccccgttgccggaacccgacagcgct
ggcggcgacggcgacgatggcagcggcagcgaacccagcgagcgcgcgctgacccagacg
cgcaacgccgtgatcaggcaggtcgccgccgagctgggcaataccccggccgtgtgccgc
aaggcctacatcgatccggtggtgtttgaaggctggcgggacggccggctgcagcggctg
gccgccaatgcccgtggcgcacgccagtgggaacaggcggcgctgaagttcctcaaggcc
gcccaccgcggcaccggaaaacgtggtgggccttcggggcaacgctag
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