Lysinibacillus sp. 2017: DCE79_03075
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Entry
DCE79_03075 CDS
T05455
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lyz
Lysinibacillus sp. 2017
Brite
KEGG Orthology (KO) [BR:
lyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyz03400
]
DCE79_03075 (addB)
Enzymes [BR:
lyz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCE79_03075 (addB)
DNA repair and recombination proteins [BR:
lyz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DCE79_03075 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
LntA_helical
UvrD-helicase
SieB
DUF3725
Motif
Other DBs
NCBI-ProteinID:
AWE06428
UniProt:
A0A2S1GYQ9
LinkDB
All DBs
Position
712381..716013
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AA seq
1210 aa
AA seq
DB search
MTLRVISGRAGTGKTTFIHQEIVDDLKTNALGNPIFILVPDQMTFSTEYELTNNYGIEGM
MRAQVMTFKRLAWFVLQKEGGIARERIDGTGYRMLLRRILEEHKDEFLLFKQAAGKRGFT
KEVEQILKEFSQYNINLQSIEVMIDALQQNGASEVLLHKMHDLQIILQQLDERIGAEFID
GDGYFPMLIERMPQMESLRDTDVYLDGFVSFNGQEFAILKELLIYAKRVTLVLPMDDPTV
DKLEGSVFYRAAMSYEKLQHEIQKLRFERGIEIEVEPRIHLQTNYRSMHSDLLHVEQSFE
APFVKPIESDGHLQILEGMNPRAEVQGIAQEIKRLVTEEKLRYKDIGIMYRQVDVYDAII
GTTFKQYEIPFFSNEKRSMLYHPFIEFSRSVVEIITSNWKFEPVFRSVKTDFYFPYNANL
AVMRDRADVLENFVIAKGIVHDRWFNDDVWHYRRFKSLEKINSVQTEDELEYEKLLASVR
DLIREPVGALQKRLKGSHITGRQIVVALYEFMEQLDVYKKLVKMQEQEEQTNALHQSFEH
EQAWNGWVHILEQFDLMFGDKEIALEDAAQILDEGFESLQFSSVPPTLDEVTVSTLEFAR
FDNKKAIFIIGVNDGVYPMRMDSGGLLSDDERETFEKSDVELAPGVKSRLLQESFLFYRA
ISSPTEYLYVTYSSADEESKGKLPSIYVNRLHKMFEIKGQDGEIKRTVTHKQIVMDPLDE
KNEAYLLDYLRHPQPAIGFLMTQLKQAQFEKRPLPEAWNALKAFYEREPEWQHVLNVVTK
PLYHVNEAEPLTEEMATELYGENFLASVSRIEKFYSCPYSHFASYGLKLQERTEFKLESF
AMGDLFHEAIRSILSEKEQVIPLNNYIACYKKANETITKLVDYFSYSILKSSHRFEYIKT
KLVKIVARTLFALINQSDLSKFKAIAHEKPFGKRDDKNAEKDDRNPLEALKIDLDDNRKM
FVRGQIDRIDAYKDAENLYLRVIDYKSSGRKLDFTEVYNGISLQLLTYLDVAMQNVPILA
KESKFVQDLSELENIIVQAAGMFYLHVHNPLVSTEDYEKLEKIESLRQEKFKLSGYMLKD
VEVAQLMDTSLEPNKASIIVPAAFKSAEDPEFNGRSSKVIEPQQMENLQEFVHHKFRSAG
NEIYRGNTEIKPYSLGNQKACTFCSFKAVCQFDQAETGNSFNELKKQSEQEVFENIEKVV
CLREDSNETE
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgacattacgtgtaatttcaggacgcgcaggtacgggaaaaacgacttttattcatcaa
gaaattgtcgacgatttaaagaccaatgcgcttggaaatcccatttttattttagtacct
gaccaaatgacgttttcaacggaatatgaattgacgaataattacggcattgaaggcatg
atgcgcgcgcaagtcatgacgtttaaacgtttagcatggtttgtcctgcaaaaagagggt
ggtattgcgcgagaacgaattgatggaacaggttaccgcatgctcttacgccgtattttg
gaagaacataaagacgagtttttactatttaaacaagcagctggcaaacgaggctttacg
aaggaagtcgagcaaattttaaaagagtttagtcagtacaatattaatttacaatcgatt
gaagtcatgatcgatgcattgcagcaaaacggtgcgagtgaagtgttgctacataaaatg
catgatttacaaatcattttacagcaacttgacgaacggattggcgcagagtttatcgac
ggcgatgggtacttcccgatgctaatcgagcgcatgccacaaatggaaagtttgcgtgat
accgatgtgtatttggacggttttgtatcgtttaatggacaagaatttgcgattttaaaa
gaactactcatttatgctaagcgcgtgacattagtgctaccaatggatgatccaaccgtt
gataaactggaaggctcagtattttatcgcgcggccatgagctatgaaaaattgcagcat
gaaattcaaaagttacgctttgaacgtggcattgagattgaagtcgagccgcgcattcac
ttgcaaacaaattatcgttcgatgcacagtgatttactgcatgtagaacagagttttgaa
gcaccatttgtgaagccaatcgaatcagatggacatttgcaaattttagaaggcatgaat
ccacgtgctgaggtgcaagggattgcccaggaaataaaacggttagtgacagaagaaaag
ttacgttataaagacattgggataatgtatcgtcaagtagatgtctatgatgccattatt
gggacgacatttaagcaatatgagattccctttttctcaaatgaaaaacgctcgatgttg
tatcatccattcattgaatttagtcgttcggtagtagaaatcattacatcaaattggaag
tttgagccggtatttagaagtgtgaaaacggacttttatttcccttacaatgcgaattta
gccgtgatgcgtgatcgcgcggatgtgttagagaattttgttatcgctaaagggattgta
catgatcgctggtttaatgatgatgtttggcattatcgccgttttaaatcgttagaaaag
attaattctgtgcaaacggaagatgagctggaatatgaaaagctattggcgtcggttcgt
gatttaattcgagagcctgttggggcattacaaaagcgcttaaagggttctcacattaca
ggacgtcaaattgttgtcgcactgtatgaatttatggagcagctggacgtctacaaaaag
cttgtgaaaatgcaggagcaagaggaacagacaaatgcacttcaccaatcatttgagcat
gagcaagcttggaatggctgggtgcatattttagaacagtttgatttgatgtttggtgat
aaggaaattgcgctagaggatgcggcgcaaattttagatgaaggctttgagtcactgcaa
ttttcaagtgtaccgccaacattagatgaagtaaccgtgtcgacattagagtttgcccgc
tttgataataaaaaggcgattttcattattggcgtcaatgacggggtgtacccgatgcgc
atggattcgggtggtttactatctgatgatgaacgtgaaacattcgaaaagtcagatgtg
gagctagcaccgggtgtgaaaagtcgcttgctacaagaaagctttttgttttaccgtgcg
atttcatcaccgacagagtatttatatgtgacctattcgagtgcagatgaagaaagtaaa
ggcaagctgccatctatttatgtgaaccgtttgcataaaatgtttgaaattaaaggacaa
gatggtgagattaaacgaacagtaacacataagcaaatcgtgatggatccacttgatgag
aaaaatgaggcgtacttactcgactatttacgtcacccgcaaccagcaatcggcttttta
atgacgcagttaaaacaagcgcaatttgaaaaacgaccgctaccagaagcttggaatgca
ctaaaagcattttatgagcgtgaacccgagtggcagcatgtattaaatgtcgtaacaaaa
ccactttatcatgtcaatgaagcagagccattaacagaggaaatggcaacggaactttac
ggcgaaaactttttagcgagtgtatcacgcattgaaaaattttatagctgcccgtattcg
cattttgcttcgtatggcctgaaattacaggagcgtaccgagtttaagttagaatcgttt
gcaatgggcgatttatttcacgaggcgattcgctcgattttatcagaaaaagagcaagtg
attccgctgaacaactatattgcgtgctataaaaaggccaatgagacgattacgaaatta
gtggattatttctcatacagcattttaaaaagtagtcatcgctttgaatatattaaaaca
aagctcgtaaaaatcgtggcgcgtacattattcgcgctgatcaatcaaagtgatttatcg
aaatttaaagcgattgcacatgaaaaaccattcggaaaacgcgatgataaaaatgccgag
aaggatgatcgtaatccattagaagcattaaaaattgatttagatgacaaccgtaaaatg
tttgtacgcgggcaaattgaccgaattgatgcgtataaagatgctgagaacttatattta
cgtgtcattgactataaatcgagtggtcgtaaattagatttcactgaagtgtataacgga
atttcattgcagctgttaacgtatttagacgtggcgatgcaaaacgtgccgattttagcg
aaggaaagtaaattcgtacaagatttatcggagcttgaaaacattattgtacaagctgct
gggatgttttatttacatgtgcataatccattagtaagtacggaggattatgaaaagcta
gagaagatcgaaagcctgcgccaggaaaaattcaagctaagtggctatatgttaaaagac
gtggaagtggcgcaactgatggacacgtcactggagccaaataaagcatcgattatcgta
ccagctgcatttaaaagcgcggaggatccagaatttaatggtcgttcatcgaaggtaatt
gagccgcagcaaatggaaaacttgcaagagtttgtacatcataaattccgttcggccggc
aatgaaatttatcgcggtaatacggaaattaaaccgtatagtcttgggaatcaaaaagct
tgtacgttttgtagttttaaggcggtttgtcaatttgaccaagcggaaacaggcaatagc
ttcaatgagttgaaaaagcaatctgagcaagaagtattcgaaaatatagaaaaggtggtg
tgcttacgtgaagattccaacgaaaccgaatga
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integrated database retrieval system
