Lysinibacillus sp. 2017: DCE79_04120
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Entry
DCE79_04120 CDS
T05455
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lyz
Lysinibacillus sp. 2017
Pathway
lyz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DCE79_04120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyz03400
]
DCE79_04120
Enzymes [BR:
lyz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCE79_04120
DNA repair and recombination proteins [BR:
lyz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DCE79_04120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
ResIII
PriA_C
DEAD
Helicase_C
Zn_ribbon_PriA
ADDB_N
PIF1
IBR_1
nSTAND_NTPase5
AAA_19
AAA_30
AAA_16
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AWE06623
LinkDB
All DBs
Position
932002..934410
Genome browser
AA seq
802 aa
AA seq
DB search
MIIAQVIVDVSAYPVDKPFDYLVPEQWEELIDTGCRVKVPFGPRNVLGFVVGITTETDVP
LNKIKPVAEIFDLEPIITDEMLALAKWLKLHTICYEIDALQVMIPGALRAKYEKFVVLSG
ETGNLPEVLQPFFEKTSKVNVKQFEKEGLLKPVKQAIRENRLMIENEVKQKGRVKQVRKV
QIASLQTLEDVEKSISTRAQKQKHLIEWMKLNSGAVIAPDEICEALHITNAVLTSVIEKG
AAQYIQQEVYRDPYTKDIVPTKFLQLTSEQQVALEKITSAIDDKRSETFLLHGITGSGKT
EVYLQAIQKTIAQNKEAIVLVPEIALTPQMTERFKSRFGDQVAVMHSGLSVGEKYDEWRK
VQKGEVKVVVGARSAVFAPFKNLGLIILDEEHESTYKQEDSPRYHARDVAIWRGNYYNCP
VILGSATPALESFARAKKGVYTLLTLENRAKNQALPTVHIVDMREQLQAGNRSMFSEPLM
EALQNRLAKKEQTVLFLNRRGYSSFVLCRDCGTTVQCPNCDISLTYHRYQEKLKCHYCGY
DEYVPQTCPQCQSENIRYFGTGTQKVEEEIYKLFPEARVLRMDVDTTKQKGSHEKILDAF
GAGEADILLGTQMIAKGLDFPNITLVGVLSADTSLHLPDYRAAEKTFQLMTQVSGRAGRH
EKLGEVFIQTYTPEHYAIELSKEQLYTPFYEREMHMRHLAGYPPYYYIALIQVSHEDVMM
AAEYAERAAQYLRSSLSFKVSVIGPTTASISRLQNRYRYQCLIKYKVEPNLIPVLLQLIK
MYRSEWIKKGIVLTVDLDPTMI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgataattgcgcaagtaattgttgacgtttctgcatatcctgtggacaaaccgtttgat
tatttagtgccagaacagtgggaagaactcatcgatacaggttgtcgtgtgaaagtacca
tttggtccacgaaatgtgctcggctttgtcgttggaattacaactgaaacggatgtccca
ttaaataaaattaaaccagtagcagaaatttttgatttagaaccgattataacggatgaa
atgctagcgttagcaaaatggctcaaactccatacaatctgttatgaaatcgatgcactt
caagtgatgatacccggtgcattacgggcgaagtatgaaaaatttgttgtgttatccggt
gagactggcaatttacctgaagtgctccaaccattctttgaaaaaacgagtaaagtgaat
gtgaagcagttcgaaaaagaagggttattaaaacctgtaaagcaagccatacgagaaaat
agattaatgattgaaaatgaagtgaagcaaaaaggtcgagtgaaacaggttagaaaagtc
caaattgcttcattacaaacacttgaagatgtagaaaaatcaatttctacaagagcacaa
aagcaaaaacatctcattgaatggatgaaattaaacagcggtgcggtaatagctcctgat
gaaatttgtgaagcactccatataacaaatgcagtattaacaagtgttattgaaaaggga
gcggcgcaatatattcagcaagaagtttaccgtgatccgtatacaaaagacattgttcca
acgaaatttttacaattaacgtcagaacaacaagtagccctggaaaagattacgagtgct
attgatgataaacgtagtgaaacatttctactacatggtattacgggtagtgggaagacg
gaagtatacttgcaggccattcaaaaaacgattgcacaaaacaaggaagcgattgtactt
gtccctgaaattgctttaaccccgcagatgactgaacgctttaaatcgcgatttggtgat
caagtagccgttatgcatagtggtttatctgtcggtgaaaaatatgatgagtggcgaaaa
gttcaaaaaggggaagtcaaagtagttgttggtgcgaggtctgcggtttttgctccgttt
aaaaatttaggactcatcattttagatgaagagcatgaatcaacatataaacaggaagat
tcgccgcgttatcatgcccgtgatgtcgcaatttggcgtggaaattattataattgtccc
gtcattttaggaagtgcaacaccggcattagaatcatttgcacgtgcgaaaaagggtgtt
tatacgttattaacactagaaaatcgggcgaagaatcaagcgttaccaactgttcatatt
gtggatatgcgggaacaattacaggcaggaaatcgctccatgttttcagagccactcatg
gaagcgctacaaaatcgacttgctaaaaaagaacagacggtactgtttttaaatcgtcgt
ggctattcgtcgtttgtgctatgtcgtgattgtgggacgacggtacaatgcccaaactgt
gatatctctctaacatatcaccgctatcaagaaaagctgaaatgccattattgtggctat
gatgaatacgttccacaaacttgcccgcagtgtcaaagtgaaaatattcgctatttcgga
acaggaacgcaaaaagtggaagaggaaatttataagttattcccagaagcgcgcgtgtta
cgaatggatgttgatacaacgaagcaaaaaggctctcatgaaaaaatactggatgcgttt
ggtgcaggtgaggcagatattttacttggaacacaaatgattgcgaagggattagatttc
ccgaatattacgcttgttggtgtactgagtgcagatacatccctccatttaccagattac
cgagcagcagaaaaaacattccagctcatgacacaagtaagtggacgtgcagggagacat
gaaaagcttggagaagtatttattcagacttatacaccagagcattatgcgattgaatta
tcaaaagagcaattgtatacgccgttttatgaacgcgaaatgcatatgagacatttagca
ggttatccgccgtattactatattgcgcttatccaagtttcgcatgaggatgtcatgatg
gcagcagaatatgcagagcgcgcggcacaatacttgcgttcgagtttatcgtttaaagtg
tctgttattggaccaactacagcaagtattagccgtctccaaaatagatatcgctaccaa
tgtttgataaaatataaagtagagccgaatttaattcctgtgctgctacaattgattaaa
atgtatcgttcagaatggattaaaaaaggtattgtattaacagtcgatttagatccaaca
atgatctaa
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