Lysinibacillus sp. 2017: DCE79_04320
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Entry
DCE79_04320 CDS
T05455
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lyz
Lysinibacillus sp. 2017
Brite
KEGG Orthology (KO) [BR:
lyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyz03032
]
DCE79_04320
03400 DNA repair and recombination proteins [BR:
lyz03400
]
DCE79_04320
Enzymes [BR:
lyz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DCE79_04320
DNA replication proteins [BR:
lyz03032
]
Prokaryotic type
DNA Topoisomerases
DCE79_04320
DNA repair and recombination proteins [BR:
lyz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DCE79_04320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
AWE06663
UniProt:
A0A2S1GZ25
LinkDB
All DBs
Position
974454..976538
Genome browser
AA seq
694 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVKASIGHVRDLPRSQMGIDTEHDYEPKYITIRGK
GPVLQDLKTAAKKAKKIYLAADPDREGEAIAWHLATALNIDVASDCRVVFNEITKEAILE
SFKSPRPINMDLVDAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVSLRLIIDREN
EIKSFEPEEYWSIDASFEKGKKPFEAFYYGNGKEKIKLTNEDQVQTILKKVKGSDFEVMN
VVKKERKRNAAPAFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIELSKKEGAVGLITYM
RTDSTRISQTAKTEAISYIEGKYGKEFVSQEVKQVKAKANAQDAHEAIRPTSAMRTPEEL
KAILSRDQLRLYRLIWERFIASQMSSAVLDTVTVDLQNNDVVFRANGSQVKFAGFMKLYI
EGTDDQTEETNKLLPEMEIGDKVKSLEIEPKQHFTQPPPRYSEARLVKTLEELGIGRPST
YAPTLDTIQKRGYVQLDTKRFVPTELGEIVHQATLEFFPEIINIEFTAQMEHNLDEIEEG
ITRWVSVIDNFYKDFEPRVKYADEEMEKIEIKDEPAGEDCEKCGGPMVFKLGRYGKFMAC
SNFPDCRNTKAIVKLIDVKCPTCKEGEIVERKSKTKRVFYGCNRYPECDFVSWDKPISRP
CPKCSTLLVEKKSKKGVQIQCTNSECDYEETPSQ
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtaatagtagaatcacctgcaaaggcgaaaacaattgaacgctat
ttaggaaagaaatataaagtaaaggcttctattggacatgtacgtgatttaccacgtagt
caaatggggattgatacagaacatgattatgaaccaaaatatattacgattcgtggtaaa
ggtcccgttttacaagatctaaaaacagcagcgaaaaaagcaaaaaaaatctatctcgcg
gccgatccagaccgtgaaggggaagcaattgcctggcatttagctacagctttaaatatt
gatgtagcatcagattgccgcgttgtctttaatgagattacaaaagaagccattttagaa
agctttaaaagtcctcgaccaattaatatggatttagtggatgcacaacaagctcgacgt
attttagaccgtcttgttggatataatattagcccgattttatggaagaaagttaaaaaa
ggtttatcagcaggccgtgtacaatcggtttcactacgtttaattattgatcgtgaaaat
gaaattaaaagctttgaaccagaagaatattggtcaattgatgcgtcgtttgaaaaggga
aaaaaaccattcgaagcattttattatggaaatggcaaagaaaaaattaaattaacaaat
gaagatcaagtacagacgattttgaaaaaagttaagggatccgattttgaagtaatgaat
gttgtgaaaaaagaacgtaaacgtaacgcagcacctgcttttacgacatcttcacttcaa
caagaggcagcacgaaaattaaatttccgtgcaaagaaaacaatgatgcttgcacaacaa
ctttatgaaggtattgagctaagtaaaaaagaaggcgctgttggtttaattacttatatg
cgtacagattcaacacgtatttcacaaactgcaaaaacagaagcaatttcatatattgaa
ggcaagtacggcaaagaatttgtatcacaagaagtgaaacaagtaaaagcaaaagcaaat
gcacaagacgcgcatgaagctattcgtccgacgagtgcaatgcgtacgccagaagagtta
aaggcgattttaagtcgcgatcaactacgcttgtaccgcctaatttgggagcgctttatt
gcaagtcaaatgtcatccgctgtactagataccgtaacagtagatttacaaaataatgat
gtcgtattccgtgcaaatggctcacaagtgaaatttgctggttttatgaagttatatatt
gaaggtacagacgatcaaacagaagaaacaaataaactattaccagaaatggaaattggt
gataaagtaaaatcattagaaattgaaccaaagcaacatttcacacagccaccgccacgt
tattcagaggcacgtttagtaaaaacgttagaagaactaggtataggtcgtccgtctacg
tatgctccaacattagataccattcaaaagcgcggttatgttcaattagatacaaaacgc
tttgtaccaacagagttgggcgaaattgttcatcaagcaacattagaatttttcccggaa
attatcaacatcgaatttactgcacaaatggaacataatttagatgaaattgaagaaggt
atcacacgttgggtgagcgttattgataatttctacaaagattttgaaccacgtgtaaaa
tatgcagatgaagagatggaaaaaatcgaaatcaaagatgaaccagctggcgaagattgt
gaaaaatgcggtgggccaatggtattcaaattaggacgatatggtaagtttatggcgtgt
tccaacttcccagattgccgtaatacgaaagcgattgtgaagttaatcgatgtgaagtgc
ccgacatgtaaagaaggcgaaattgttgaacgtaagtcaaaaacaaagcgtgtattttat
ggatgtaatcgctacccagaatgtgatttcgtttcatgggataaaccaatcagtcgacct
tgtccaaaatgtagtactttattagtagagaaaaaatcaaaaaaaggtgttcaaattcag
tgtacaaatagcgaatgcgactatgaagaaacaccgtcacaataa
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