Lysinibacillus sp. 2017: DCE79_04610
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Entry
DCE79_04610 CDS
T05455
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lyz
Lysinibacillus sp. 2017
Brite
KEGG Orthology (KO) [BR:
lyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lyz03016
]
DCE79_04610
Enzymes [BR:
lyz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DCE79_04610
Transfer RNA biogenesis [BR:
lyz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DCE79_04610
Prokaryotic type
DCE79_04610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
UBA_HOIP
Motif
Other DBs
NCBI-ProteinID:
AWE06719
LinkDB
All DBs
Position
1031352..1032263
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AA seq
303 aa
AA seq
DB search
MNGILPLWKERGMTSHDCVFKLRKILKTKKVGHTGTLDPGVEGVLPICIGQATRIAEYLT
DAGKTYEAVVSIGRTTATEDAEGETVEENTDYKSFSREEIQQALISLTGEIEQTPPMFSA
VKVNGKKLYEYARAGQTVERPTRKITIYELELLDDAETFEGETVTFSIRIKCSKGTYIRT
LAVQIGEALGYPAHMHELVRTASGTFTKENCFTLAEIAELMDKGEQEKFLLPVEYALSNY
PYVEITPDVEKQIFNGQVLPMHALLKEHDKMVYGVDGRAFAVYIAHPIKIGQMKPDKMFP
ELD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtattcttccattatggaaagagcgtggaatgacgagtcatgactgcgtgttt
aagttacgaaagattttaaaaacgaaaaaggttggccatacagggacccttgatccaggt
gtagaaggcgtattaccaatttgtatcggacaagcgactcgtatcgctgaatatttaact
gatgcagggaaaacatatgaggcggttgtgtcaatcggtcgtaccacagcgacagaagat
gcagaaggcgaaacagttgaagaaaatacggattacaaatcattctcgcgtgaagaaatc
caacaagcacttatttctttaactggtgaaattgagcaaacaccacccatgttttcagcc
gttaaagtaaacggtaaaaagctatacgaatatgcacgtgcaggtcaaacggtagaacgt
ccaacacgtaaaatcacaatttatgagctagagcttttagatgacgcagaaacgtttgaa
ggtgaaacagtaacgttttctattcgaattaaatgttcaaaaggtacatatattcgtaca
ttagctgtgcaaattggggaagccctaggatacccagcacatatgcatgaattagtacgt
acagcttcaggaacatttacaaaagaaaattgttttacattagctgaaattgcggaatta
atggacaaaggcgagcaagagaagtttttattgccagttgagtatgccctatcaaattat
ccgtatgttgaaattacgccagatgttgaaaagcaaattttcaatggacaagtactacca
atgcatgcattattaaaagaacatgataaaatggtgtatggtgtagacgggcgagcattt
gcggtatatatcgcacatccgataaagattgggcaaatgaagcctgataaaatgtttccc
gaactagattag
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