Lysinibacillus sp. 2017: DCE79_04760
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Entry
DCE79_04760 CDS
T05455
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lyz
Lysinibacillus sp. 2017
Pathway
lyz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCE79_04760 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyz03019
]
DCE79_04760 (rny)
Messenger RNA biogenesis [BR:
lyz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DCE79_04760 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
AWE09224
UniProt:
A0A2S1H6E1
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Position
1063704..1065257
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AA seq
517 aa
AA seq
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MESVLPALFGFAVGVAVIYFYMKQVNESKVTGAKHVASQIVDEAKREADALKKEALLEAK
DETHKFRTEAENDIRERRGELQKQENRLLQREENLDRKDETLNKRETGLERKEEALSSRQ
QHIEQMESKVEELVASQKTELERVAGLTREEAKEVILKEVENELTTDISVMTKEAETRAK
EESDKKAREILSLALQRFAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGID
LIIDDTPEAVILSGFDPIRRETARLALEKLVQDGRIHPARIEEMVEKSRREVDEQIRETG
EQTSFDVGIHNLHPDLMKILGRMKYRTSYGQNVLKHSVEVAHLAGLLAAELGEDVTLARR
AGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEATSVIAVLVAAA
DALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSFAIQAGREVRIIVQPEKIDDLT
SHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagtactccctgctttgtttggatttgctgtcggtgtcgctgttatctatttt
tacatgaaacaagtgaatgaatcaaaagtaactggtgcaaagcatgttgcatcgcaaatc
gttgatgaagcgaagcgtgaagcagatgctctgaaaaaagaagcactacttgaagcgaag
gatgaaactcacaaatttcgtactgaagcagaaaatgacattcgtgaacgtcgtggagag
cttcagaaacaagagaaccgtttattgcaaagagaagaaaatcttgaccgcaaagatgaa
actctgaataaaagagagacaggcttagagcgtaaggaagaagctctatcaagcagacaa
cagcatattgaacagatggaaagcaaagtggaagaacttgttgcaagtcaaaaaacagag
cttgaacgtgttgcaggactgactcgtgaagaagcgaaagaggttattctgaaggaagtt
gaaaatgaactgacaacagatatctcagtaatgacaaaagaagcagaaacacgtgcgaaa
gaagagtcagacaaaaaggctcgtgagattttatcacttgcattacaacgctttgcagca
gaccatgttgcagaaacaacagtgtccgttgtaaacttaccaaatgatgagatgaaaggt
cgtatcattggacgtgaaggtcgaaacattcgaacattggaaacgcttacgggtatcgat
ttaattattgatgatacacctgaagcagttattttatctggcttcgatccaattcgtcgt
gaaacagctcgtctagcattagaaaaattagtacaagatggtcgtattcacccagcgcgt
attgaagaaatggttgaaaaatctcgccgtgaagtggatgaacaaatccgcgaaacaggt
gagcaaacttcatttgatgtaggtattcataatttacatccagatttaatgaaaattcta
ggtcgtatgaagtatcgtacaagttatggtcaaaacgtattaaagcactcagtagaagtt
gcgcatttagcgggattacttgctgcagagcttggcgaagacgtgacattagcgcgtcgt
gcaggtttactgcatgatatcggtaaagcaattgaccatgaagtagaaggaagccacgtg
gaaattggtgtagaattagcaacgaagtataaagaacacccagttgttattaactcaatt
gcctctcaccatggtgatacagaagccacttcagttatcgcagtacttgttgcagcagcc
gatgcattatcagcagcgcgtccaggtgctcgtagcgaaacacttgaaaactacattcgt
cgcctagaaaaactcgaagaaatttctgaaagttatgacggcgtcgaaaaatcatttgca
attcaagcaggtcgtgaagtccgtattattgttcagcctgagaagattgatgatcttact
tcacatcgattagcgcgagatattcgtaagcgaattgaagaagaacttgattatccaggt
catattaaagtaacggttattcgtgaaactcgagcagttgaatacgcaaaataa
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