Lysinibacillus sp. 2017: DCE79_11585
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Entry
DCE79_11585 CDS
T05455
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lyz
Lysinibacillus sp. 2017
Pathway
lyz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lyz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DCE79_11585 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lyz02000
]
DCE79_11585 (abc-f)
01504 Antimicrobial resistance genes [BR:
lyz01504
]
DCE79_11585 (abc-f)
Transporters [BR:
lyz02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
DCE79_11585 (abc-f)
Antimicrobial resistance genes [BR:
lyz01504
]
Gene variants
Macrolide resistance genes
Transporters
DCE79_11585 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_22
AAA_23
NACHT
AAA_18
Roc
MMR_HSR1
RNA_helicase
RsgA_GTPase
ABC_tran_Xtn
AAA_15
AAA_16
AAA_5
nSTAND1
ORC-CDC6-like
Rab_bind
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
AWE07989
LinkDB
All DBs
Position
complement(2383031..2384491)
Genome browser
AA seq
486 aa
AA seq
DB search
MPIEIKNMNFGFDALDEPIFQNVDLNIDTKWRLGLIGRNGRGKTTLLDLLMKKYPYEGEI
LCDVEFVYFPQTIVNKESLTYYAIDEVMPVELWKLERECQYLQLDKAILWQPFEQLSGGE
QTKVLLAALFCEESRYPLLDEPTNHLDIQARTIVINYLKKKKGFIVVSHDRTFVDEVVDH
ILAIEKSQLTIFKGDFSTYEQQKEHQDQYELEQNKLLKSEIDRLKQTAREKSDWAIKKEK
LSGNDPFGNAQAKRMMKRSKVIEKRMNFKIEEKTKLLHNIESVSSLTINCLFSHRNPVLR
VKDFSLSYGEKPLFQPITFELYQGEQVALVGPNGSGKSSLLKYLIDQSFSGSISGEVILP
HGLTKSNIRQIHNDNTGLLKDFAVENQLDYTLFLNNLRILGFERDVFNVPIEYMSNGQQK
KVEFAKSLGTSAEMFIWDEPLNYLDVFNHKQIETMVLAYKPTLLFVEHDQTFLSKIATKT
IEIIPY
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgccgatagagattaaaaatatgaatttcggatttgatgcgctggatgaaccgatattt
caaaatgtagatttaaatatagatacaaaatggcgtcttggtttaattggaagaaatgga
cgtggaaaaactacgctattagacttactgatgaaaaagtacccttatgaaggtgaaata
ctttgtgatgtggagtttgtttacttcccgcaaacgattgtaaataaggaaagcttaaca
tactatgcgattgatgaagtaatgccagttgaattatggaaactagagagagaatgccaa
tacctgcaattagataaagcgattttatggcaaccatttgaacaattatctggaggtgag
caaaccaaagtgttgctagcagcacttttttgtgaagaatctcgctacccccttcttgat
gagccaacgaatcatttagatattcaggcaagaactattgtcattaactatttgaaaaag
aaaaagggcttcattgtagtaagccatgaccgcacttttgtcgatgaagttgtcgatcac
attttggctattgaaaaaagccaattaacgatttttaaaggtgatttttctacttacgag
caacaaaaggaacatcaggatcagtatgaattagaacaaaataaactattgaaatcagaa
attgatcggcttaagcaaacagcaagggaaaagtctgattgggccatcaaaaaggaaaaa
ctatcaggcaatgacccctttggaaatgcacaggctaagcggatgatgaaacgatcgaaa
gtaattgaaaaacgtatgaacttcaaaattgaagaaaagacaaagctacttcacaatatt
gaatctgtcagctcattaacaatcaattgtctattcagtcatcgtaatcctgtacttaga
gtgaaagatttttcattaagttacggtgaaaagccactctttcaaccgattacatttgaa
ctctatcaaggtgaacaagtcgcacttgttggaccgaatggaagcggtaaatcttcgcta
ttaaaatacttgatcgatcaaagtttttctgggtcaattagcggtgaggttatacttcca
catggattgacgaaaagtaatattcgccaaattcacaatgacaatacggggttattaaaa
gattttgctgttgaaaatcaacttgattacacgctatttttaaataatctccgtattcta
gggtttgaacgtgatgtgtttaatgttccaattgaatatatgagtaatgggcaacagaag
aaggtcgaatttgccaaatcattaggaacatccgcagaaatgtttatatgggacgagccg
ttaaattatttggacgtgtttaaccacaagcaaattgaaacgatggttcttgcttataaa
cctacccttttatttgttgaacatgatcaaacatttctttcaaagattgcgacaaaaacg
atagaaattattccttattaa
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