Lysinibacillus sp. 2017: DCE79_12170
Help
Entry
DCE79_12170 CDS
T05455
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
lyz
Lysinibacillus sp. 2017
Pathway
lyz02024
Quorum sensing
lyz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCE79_12170
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCE79_12170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyz03019
]
DCE79_12170
03036 Chromosome and associated proteins [BR:
lyz03036
]
DCE79_12170
Messenger RNA biogenesis [BR:
lyz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DCE79_12170
Chromosome and associated proteins [BR:
lyz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
DCE79_12170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
AWE08098
LinkDB
All DBs
Position
complement(2490663..2490890)
Genome browser
AA seq
75 aa
AA seq
DB search
MKSTNLQDTFLNQLRKNNTFVTVFLLNGFQLKGLIKSYDNFTVLLETEGKQQLIYKHAIS
TFVPTKNVALTEEEA
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgacgaacttacaagatacgtttttaaaccaattacgaaaaaataatacattt
gtaacagtatttttattaaacggttttcaattaaaaggtttaattaaatcctacgataac
tttacggtattgttagaaacagaagggaaacaacagttaatttataaacatgcgatttca
acttttgttcctacaaaaaatgttgcgttaacagaagaggaagcgtaa
DBGET
integrated database retrieval system