Lysinibacillus sp. 2017: DCE79_12210
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Entry
DCE79_12210 CDS
T05455
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
lyz
Lysinibacillus sp. 2017
Brite
KEGG Orthology (KO) [BR:
lyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lyz03016
]
DCE79_12210
Enzymes [BR:
lyz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
DCE79_12210
Transfer RNA biogenesis [BR:
lyz03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
DCE79_12210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Dor1
Spc42p
DUF3079
Motif
Other DBs
NCBI-ProteinID:
AWE08106
UniProt:
A0A2S1H364
LinkDB
All DBs
Position
complement(2500990..2502507)
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AA seq
505 aa
AA seq
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MNEEQRLASQQIKQPKEEKDYSKYFEKVFTAPSLKDAKKRGKEEVKYHKDFDIDEKYLRM
GTDRKFYIRTYGCQMNEHDTEVMAGIFMQLGYTPTEMIEEADVVLLNTCAIRENAENKVF
GELGFLLKYKRKNPEMLIGVCGCMSQEESVVNKILKQYQHVDMVFGTHNIHRLPNILHDA
YMSKEMVVEVWSKEGDVIENLPKKRIGSIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRP
EEIIQEVRDLAAQGYKEIMLLGQNVNAYGKDFEDIEYRLGDLMDELRKIDIPRIRFTTSH
PRDFDDYLIEVLAKGGNLVDHIHLPVQSGSNEILKIMARKYTREHFLQLVDKIKVAIPGV
TLTTDIIVGYPNETEAQFQETLDLYRQVGFDMAFTYIYSPREGTPAAKMIDNVTEEEKKD
RLQRLNTVVGEFSAKALKDLEGQIVEVLVEGSSKRRDDVLAGYTRKNRLVNFKADPKYIG
KLVQVKILEAKSYSLMGEFVEEIKE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagaacaacgactagctagtcagcagattaaacaaccaaaagaagaaaaagac
tatagtaaatatttcgaaaaagtatttacggctccttcgttaaaagacgcgaaaaaacgt
ggtaaagaagaagttaaatatcataaagattttgatatagatgaaaagtatttaagaatg
ggtacagatcgtaagttttacattcgtacatatggctgccaaatgaacgaacacgacaca
gaagtaatggctggtattttcatgcagcttggctatacaccgacagaaatgatcgaagaa
gcagatgtagtgctattaaacacatgtgcaattcgtgaaaacgcagagaacaaagtattc
ggtgagttaggcttcttgttaaaatataaacgaaaaaatccagagatgttaatcggcgtt
tgtggatgtatgtcgcaagaagaatccgtagttaacaaaattttaaaacagtaccagcat
gttgatatggtgttcggtacacataatattcaccgtttaccaaacattttacatgacgcc
tatatgtcgaaagaaatggtcgtagaagtttggtcaaaagaaggcgatgtcatcgaaaac
cttccgaaaaagcggattggctcgattaaagcatgggtgaacattatgtatggctgtgat
aaattctgtacctactgtatcgttccttatacacgtggtaaagagcgttctcgccgtcca
gaagaaatcatccaagaagtacgcgatttagccgcacaagggtataaggaaattatgcta
cttggtcaaaatgttaatgcatatggcaaagacttcgaagatattgagtaccgtttaggt
gacttaatggatgaattacgtaaaattgatattccacgaattcgtttcacaacaagtcat
ccacgagacttcgatgattatttaatcgaagtgttagcaaaaggtggcaacttagtagat
catattcatttaccagtacaatctggctcaaatgaaattttaaaaattatggcgcgtaaa
tatacgcgtgagcactttttacaattagttgataagatcaaagtagctattccaggagta
acgttaacaactgatattatcgttggttatccgaatgaaacggaagcacaattccaggaa
acgcttgatctttatcgccaagtaggctttgatatggcgtttacctacatctattcgcca
cgtgaaggtacaccggctgcgaaaatgatcgacaacgtaactgaagaagaaaagaaagac
cgcttacaacgtttaaatacagtggtaggggaattttctgcaaaagctttaaaagattta
gaaggtcaaatagtagaagttttagttgaaggcagcagtaaaagacgagatgatgtttta
gctggctatacgcgtaaaaaccgtcttgtaaactttaaagcggatccaaaatacattgga
aagcttgttcaagtaaagattttagaagcaaaatcatactcgcttatgggagagtttgtt
gaagaaattaaagaatag
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