Lysinibacillus sp. 2017: DCE79_13355
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Entry
DCE79_13355 CDS
T05455
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lyz
Lysinibacillus sp. 2017
Pathway
lyz03030
DNA replication
lyz03430
Mismatch repair
lyz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DCE79_13355
03430 Mismatch repair
DCE79_13355
03440 Homologous recombination
DCE79_13355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyz03032
]
DCE79_13355
03400 DNA repair and recombination proteins [BR:
lyz03400
]
DCE79_13355
Enzymes [BR:
lyz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DCE79_13355
DNA replication proteins [BR:
lyz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DCE79_13355
DNA repair and recombination proteins [BR:
lyz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DCE79_13355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
SSB
Motif
Other DBs
NCBI-ProteinID:
AWE08324
UniProt:
A0A2S1H3V1
LinkDB
All DBs
Position
complement(2741863..2744943)
Genome browser
AA seq
1026 aa
AA seq
DB search
MVVYPQIRTSADLLKSTIRIEELIPFLQQQKAKSCAIVNTKLYGLLPFVHQMKKAGIHPV
VGLTIQLEVTEEISLPLVLYAKNNQGYKNLLKVSSSIAIRQQQTIPLRWLTAYASGIVCV
VPVIAQQAIWLQQSIEPTIQVLKESYHSDLYIGISRILGSEQQEERAILLAEENALKIIA
LHESLFLKQDDYFSYEVAQAIETGVKLSEATDHEPLQESYVLTNEEWLARFSNKIEWLEQ
TETLLLSCQVTIDSDQVYMPKFPLEQGKTAEQVLQQEVLSGLKVRLNVEALPEAYEKRML
YELHVIQSMGYSDYFLIVADFMRFAREEQILTGPGRGSSASSLVAYALQITQVDPLHYDL
LFERFLNPERVSLPDIDIDFIDTRRHEVIQYVAQKYGKQHVAQIITFGTLSAKAVARDVA
RMFNFESDTLEMISKLIPNKLGTTLQDAYKQSEPLRAWIASEPIRQKWFAAALRLEGLPK
NASTHAAGVVLSPVPLVDVIPIEEGHDDIYLTQWPMVEVEQTGLLKIDFLGLRNLTIIEQ
IRRSIQFSHHLQLNINQIPLQDEATFQLLQRGDTAGIFQLESDGMKNALREIRPTHFLDI
VAVNALYRPGPMEFIPVYARRKHQQEQVVMPHPALAPILQETYGVIVYQEQIMRIANILA
GFTIGQADLLRRAVSKKKREVLEEQRAAFVRGAMQQGYEQHVAVEVYELIVRFADYGFPK
SHAVAYSIISYQMAYLKANFPVNFYAALLTNATGNADKLAQILAEAKSQNIEILPPSINR
SMRHFKVENGKIRFSLSAIKGVPQPFLQKLITARKERQQPFESIFDLAIALTTTNFTRKI
MEPLIKAGALDEFGKDRATLLATIEGAQKQADFVRPTEGEDLFDGVLLAFGKPKYTETSP
MPEKILLQFEKEVLGFYLSDHPIVKVRPHFREVTATVQMLPKLKENMYVKMIGIVSEMRQ
LRTKRGELMAFVQLEDEFGLVSLTLFPKEYQLVAGKLQEGTLLYIEGNLELRFNKAQVKV
KHIVIK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgtttatccacaaatacggacaagtgccgatttattaaaaagtacgattcgtatc
gaagaactcatcccttttttacaacaacaaaaggcaaaaagctgtgcaattgtcaatacg
aaattgtacggacttttgccttttgtgcatcaaatgaaaaaggctggcattcatcccgtt
gttggcttaacgatacaactcgaagtaacagaagaaatctctttaccacttgtcctttac
gcaaaaaataatcaaggctataaaaacttattaaaagtttcaagcagtatagccattaga
caacagcaaacaattcctttgcgttggttaacagcctatgccagtggaattgtttgtgtg
gttccagtaatagcccaacaagcgatttggcttcaacaatcgattgaaccgaccatacag
gttttaaaggaaagctatcactcggatttatatattggtatttctcgaattttagggagt
gagcagcaagaagaacgtgctattttattggcagaggaaaatgcactgaaaattattgca
cttcatgaaagcttatttttaaaacaagacgattatttttcatatgaagtggcgcaagca
attgaaacaggcgtgaagctaagtgaagctacagatcatgagccgttacaagaaagctat
gtgctaacaaatgaagaatggctagctcgcttctctaataaaatagaatggttagagcaa
acagagacacttttattaagctgccaagtgacgattgatagtgatcaagtatatatgccg
aagttcccgcttgaacaagggaagacggctgagcaggttttacagcaggaagtactgagt
ggcttaaaagttcgcttaaatgttgaagcattgccagaggcttacgaaaagcgcatgttg
tatgaacttcatgtaattcaatcgatgggttattcagattactttttaattgttgctgat
ttcatgcgttttgcacgagaagaacaaattttaacgggaccaggacgtggttcatctgct
tcttcacttgttgcatatgccctgcaaattacacaagttgatccactgcactatgattta
ttatttgaacgtttcttaaatcctgaacgcgtgtcattaccagatattgatattgatttt
attgatacgagacgtcatgaagtgattcaatatgtcgcgcaaaaatacggtaagcagcat
gtcgcccaaattattacgttcgggacattgtctgctaaggcagtagcgcgagatgtagcg
cgaatgtttaattttgaaagcgatacattagagatgatttcaaaattgatcccgaataag
cttggtacgacgttgcaagatgcctataaacaatcagagcctttacgtgcttggattgct
agtgaaccgattcgtcaaaagtggtttgctgcagcattacgtttagaaggtttgccaaag
aatgcatcaactcatgcggcaggtgtcgttttaagtccagtaccacttgtcgatgtaatt
ccgattgaggaaggacatgacgatatttatttaacgcagtggccaatggtagaagtggaa
caaacaggtctacttaaaatagattttttaggactacgtaatttaacgattattgaacaa
attcgtcgttcaattcagttttcacatcatttgcaactcaatattaatcaaattccttta
caagatgaagcaacattccaactattgcagcgcggtgatacagcaggtattttccaactc
gaatcagatggtatgaaaaatgcattgcgtgaaattcgtccaacacactttttagatatt
gtcgcggttaatgccctttatcgtccaggtcctatggagtttattccagtatatgcccgc
agaaagcaccagcaggaacaagtcgttatgccgcatccagcactcgcacccattttacaa
gaaacatatggcgtcattgtttatcaggagcaaatcatgcgcatcgccaatatcctagcc
ggttttacgataggacaagcggatttactccgtcgtgcggtcagtaagaaaaagcgtgaa
gtgttagaagaacagcgtgctgcgtttgttcgtggagcgatgcaacagggctatgaacag
catgtagcagtggaagtatatgagttaatcgtacgctttgcagattatggtttcccgaaa
agtcacgcggttgcctatagcatcatttcttatcaaatggcgtatttaaaagcaaatttt
cctgttaatttttacgctgcattattaacgaatgcaacaggtaatgctgataagctcgcc
cagattttagcggaagcaaaatcacaaaatatcgagattttaccaccatccatcaatcga
agtatgcgtcatttcaaagtggaaaatggtaagattcgatttagtttatcggccattaaa
ggcgtgccacagccatttttacaaaagctaataacagctcgtaaagaaagacagcagcca
ttcgaatcgatttttgatttagccattgcgttaacgacgacgaactttacacggaaaatt
atggagcctttaattaaggctggagcactcgatgaattcggaaaagatcgtgccacactt
cttgcaacgattgaaggggcacaaaaacaggctgattttgtacgtccaactgaaggggaa
gacttatttgatggcgtgctgcttgcttttgggaaaccaaaatacacagaaacatcccca
atgcctgagaaaatattacttcaatttgaaaaagaagttcttggattttatttatcagat
catcccattgtaaaagtgcgaccgcatttccgagaagtgactgcaactgtgcaaatgcta
ccaaagctaaaagaaaatatgtatgtcaaaatgattggtattgttagcgaaatgcgtcag
cttcgtacaaagcgcggagaattaatggcgtttgtacaacttgaggatgaatttggactt
gtctctttaacacttttccccaaagaatatcaacttgttgcaggtaagttacaagagggc
acattattatatattgaaggaaatttagaacttcgcttcaataaagctcaagtaaaagtg
aaacatattgttataaagtga
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