Lysinibacillus sp. 2017: DCE79_13635
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Entry
DCE79_13635 CDS
T05455
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lyz
Lysinibacillus sp. 2017
Brite
KEGG Orthology (KO) [BR:
lyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lyz03009
]
DCE79_13635
Enzymes [BR:
lyz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
DCE79_13635
Ribosome biogenesis [BR:
lyz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DCE79_13635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AWE08379
UniProt:
A0A2S1H4Z8
LinkDB
All DBs
Position
complement(2805005..2805718)
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AA seq
237 aa
AA seq
DB search
MRLDKLLANMGYGSRKEVKVLLKQKAVTVDGVEVKDSAMHVNPEKQNVSVFGERVEYIEF
IYVMMNKPPGVISATEDKYDPTVIELLDPSIQHFEPFPVGRLDKDTEGLLLITNDGSLAH
NLLSPKKHVSKWYYAKIDGVVTEVDIEAFAQGVTLDDGYHTQPGELKILASGEESEIELM
IQEGKFHQVKRMFEAVGKTVTYLKRLSMGPLQLDEELELGEYRELTEEELTQLLERK
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagataaattattagcaaacatgggttatggctcacgaaaagaagtaaaagtt
ctattaaagcaaaaggcagttaccgtggatggggtagaagtaaaagattctgcgatgcat
gtcaatccagaaaagcaaaatgtttcagtatttggcgagcgtgtagaatacattgagttt
atttatgtcatgatgaataagccacctggtgttatttcagctacagaagataaatatgat
ccaacggttattgagttactagacccatctatacaacattttgagcctttcccagtaggt
cgattagataaagatacggaagggcttttactcatcacaaatgacgggagcttagcgcat
aacttactttcaccgaaaaagcatgtatcaaaatggtattatgcaaaaattgatggggtt
gttaccgaagttgatatcgaagcatttgctcaaggtgtgacactcgatgatgggtatcat
acacaaccaggtgaactgaaaattttggcttcaggtgaagagtcagaaatcgaactgatg
attcaagagggtaagttccatcaagtaaaacgtatgtttgaagcagttggtaaaacagtt
acctacttaaaacgactatcaatgggacctttacagcttgatgaggagcttgaattaggg
gaataccgagaattaacagaagaagagttaacgcaacttttagaacgtaaataa
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