Lysinibacillus sp. 2017: DCE79_16890
Help
Entry
DCE79_16890 CDS
T05455
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
lyz
Lysinibacillus sp. 2017
Brite
KEGG Orthology (KO) [BR:
lyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyz03021
]
DCE79_16890
Transcription machinery [BR:
lyz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DCE79_16890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
TnsD
DUF1492
HTH_37
HTH_3
HTH_28
Sigma70_ECF
DUF134
HTH_50
KORA
GerE
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AWE08909
LinkDB
All DBs
Position
complement(3457373..3458158)
Genome browser
AA seq
261 aa
AA seq
DB search
MSKESLPKNSSKEEVLNWIAEYQEHESDEAQTNLVLRYQQLVESIARKYSHGKSYYDDIV
QVGMLGLLGAIRRFDPSFGRSFEAFAVPTIVGEIKRFLRDKTWDVHVPRRIKELGPRIKA
AVEALTTEYQRSPSISEIASYLEVQDEEVLEAMEMGRSYQALSMDHSIESDSDGSTVTLF
DVVGKEDDGFESTNRSMIVADAMSVLNERERQIIQLTYLDQLSQKEAGERLGISQMHVSR
IQRKAIKILQDTIIASGGVTL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagaatcactacctaaaaattcatcaaaagaagaggtattaaactggatcgca
gaatatcaagagcatgaaagtgacgaggctcagacaaatttagttttgcgttatcaacag
ttagtagagtcaattgctcgtaaatattcacatggtaaatcttattatgatgatattgta
caagtaggtatgcttggattattaggcgcgattcgacgatttgacccttcttttggaaga
agttttgaagcatttgcggtcccgacaatcgttggggaaattaaacgttttttacgtgat
aaaacgtgggatgttcatgttccaagacgtattaaagagctggggcctcgaattaaggcg
gcagttgaagcattaacaacggaataccaacgctctccgtccattagtgaaattgctagt
tacttagaagtgcaggatgaagaagtactagaagcaatggaaatgggacgtagttatcaa
gcgttatcaatggatcattccattgaatctgattcagatggcagcacggtaacactattt
gatgttgtcggaaaagaagatgacggttttgaatcgacaaatcgtagtatgattgttgca
gatgcaatgagcgttttaaatgagcgtgaacgccaaattattcaattaacttatttagat
cagttaagccaaaaagaagctggagaacgactgggcatttctcaaatgcacgtatctcgt
attcagcggaaagcaatcaagatattacaagataccattattgcgagtggtggcgttaca
ctataa
DBGET
integrated database retrieval system
