KEGG   Lysinibacillus sp. 2017: DCE79_16955
Entry
DCE79_16955       CDS       T05455                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
lyz  Lysinibacillus sp. 2017
Pathway
lyz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lyz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DCE79_16955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lyz03019]
    DCE79_16955
   03009 Ribosome biogenesis [BR:lyz03009]
    DCE79_16955
Enzymes [BR:lyz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DCE79_16955
Messenger RNA biogenesis [BR:lyz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DCE79_16955
Ribosome biogenesis [BR:lyz03009]
 Prokaryotic type
  rRNA helicases
   DCE79_16955
SSDB
Motif
Pfam: DEAD Helicase_C ResIII NDK CMS1 Helicase_RecD
Other DBs
NCBI-ProteinID: AWE08922
UniProt: A0A2S1H5K8
LinkDB
Position
complement(3467022..3468593)
AA seq 523 aa
MTNFSELNISESTLRSIKRMGFEEATPIQEGTVKFAMDGRDVLGQAQTGTGKTAAFGIPL
IEKIDPKNPNIQALVIAPTRELAIQVSEELYKLGFDKRVKLLSVYGGQEIGRQIRALKNH
PQIIVGTPGRIQDHINRRTLRLDEVQTLVLDEADEMLNMGFIDDINAILENVPSTRQTLL
FSATMPPAIRKIAETFMKNPEIVKIKTKELTMENIEQFYVKATDREKFDALSRLLDSQKP
ELAIIFGRTKRRVDELSQALGLRGFIAEGIHGDLSQAKRISVLRQFKEGKIDILIATDVA
ARGLDISGVTHVFNFDIPQDPESYVHRIGRTGRAGKSGIAVTFVTPREMGYLRIVEETTK
KRMTPLRPPSSEEALVGLQEDAMKSLVQLVQNNDLGNYRELAAQLLENNEALDLVAAALK
SITKEPDATPVSLSEERPLPMRRSGNGGGGGGRGRGGNDRGRGGRGGDRRSGNGGGGDRR
REGSASRSGSASRDGGRREGGARREGGSPAPSRDRRPRQRRED
NT seq 1572 nt   +upstreamnt  +downstreamnt
ttgacaaatttttcagaattaaatattagtgaatctacattacgttcaattaaacgtatg
ggatttgaagaagcaacaccaatccaagaaggtacagttaagtttgcaatggatggccgt
gacgtattaggtcaggcgcaaactggtacaggtaaaacagctgcatttggtattccttta
atcgagaaaattgatccaaaaaacccaaatatccaagctttagtaattgccccaactcgt
gaattagcaatccaagtttcagaagaactttataaattaggctttgataaacgcgtaaaa
ttattatcagtttatggtggtcaagaaatcggtcgtcaaatccgtgctcttaaaaaccat
ccacaaattattgttgggacaccaggtcgtattcaagaccatattaaccgtcgtacatta
cgcttagatgaagttcaaactttagtattagacgaagcagatgaaatgttaaacatgggc
ttcattgatgacattaacgcgattttagaaaacgtgccatcaactcgtcaaacattatta
ttctctgcaacaatgcctccagcaatccgtaaaattgctgagacattcatgaagaaccca
gaaatcgttaaaattaaaacgaaagaattaacaatggaaaacatcgaacaattctacgtg
aaagcaactgatcgtgaaaaattcgatgcattatctcgtttattagactctcaaaaacca
gaattagcaatcatcttcggccgtacaaaacgccgtgttgatgagctttctcaagcttta
ggtttacgtggtttcatagctgaaggtatccatggtgatttatctcaagcaaaacgtatt
tctgtattacgtcaattcaaagaaggtaaaattgacatcctaatcgcaactgatgttgct
gctcgtgggttagatatctcaggtgtaacacatgttttcaacttcgatattccacaagat
cctgagtcttatgttcaccgtatcggtcgtacaggtcgtgcaggtaaatctggtattgct
gtaacattcgtaacacctcgtgaaatgggttacttacgtatcgtagaagaaactacgaaa
aaacgtatgactcctttacgtccaccatcatctgaagaagctttagttggcttacaagaa
gatgcgatgaaatcattagtgcaattagtacaaaacaatgacttaggtaactatcgtgaa
ttagcagctcagttattagaaaataacgaagcgttagatttagttgctgcagcattaaaa
tcaatcactaaagaacctgatgctacaccagtatcattatctgaagaacgtccacttcca
atgcgtcgtagtggtaatggcggaggcggcggaggccgtggccgtggtggtaatgatcgt
ggtcgtggaggccgtggtggtgaccgtcgtagtggtaatggcggtggtggagatcgtcgt
cgtgaaggtagcgcaagccgtagtggtagcgcaagccgtgatggaggtcgccgtgaaggt
ggtgcccgtcgcgaaggtggaagcccagctccaagtcgtgaccgtcgtcctcgtcaacgt
cgcgaagactaa

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