Lysinibacillus sp. 2017: DCE79_18025
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Entry
DCE79_18025 CDS
T05455
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lyz
Lysinibacillus sp. 2017
Brite
KEGG Orthology (KO) [BR:
lyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyz03400
]
DCE79_18025
DNA repair and recombination proteins [BR:
lyz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DCE79_18025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
DUF7125
nSTAND_NTPase5
NTPase_1
RecA_N
nSTAND3
AAA_5
ABC_tran
SLFN-g3_helicase
AAA_16
AAA_14
ATPase_2
AAA_24
KdpD
AAA_30
KTI12
CbiA
AAA
GvpD_P-loop
DAP3
AAA_29
MeaB
Fer4_NifH
NACHT
NPHP3_N
AAA_19
MCM
DUF7129
AAA_31
ArsA_ATPase
AAA_18
DZR
Glyco_transf_N
Motif
Other DBs
NCBI-ProteinID:
AWE09118
LinkDB
All DBs
Position
complement(3664912..3666285)
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AA seq
457 aa
AA seq
DB search
MAKKKSKFMCSSCGYEAAKWMGRCPGCGEWNTMNEEIEIISKGVRGAFQHSTTTTKATPI
INVEVQEETRIVTQMGEFNRVLGGGIVPGSLVLIGGDPGIGKSTLLLQISALLSNQGKRV
LYISGEESVRQTKLRAERLGVKSPELYIYSETNLEFLNQTIEEVQPKFVIVDSIQTVHHP
EVTSAPGSVSQVRECTAELMRIAKTKNIAIFLVGHVTKEGQIAGPRILEHMVDTVLYFEG
ERHHNHRILRSQKNRFGSTNEIAIFEMLQGGLKEVLNPSELFLQERSQGAPGSTVVASME
GTRPILVEIQSLVTPTSFNYPKRMATGVDQNRVQLLMAVLEKRMGMMLQAQDAYIKVAGG
VKLDEPAIDLAVLTSIVSSFKDQAVRPTDCFIGEVGLTGEVRRVSRIEQRVQEAAKLGFK
RAIIPASNIGGWDFPEGIQIVGVETISDALRSSFQDL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaaaaatcgaagtttatgtgtagtagctgtggctatgaagcggcaaaatgg
atggggcgctgtccaggctgtggcgaatggaatacgatgaatgaagaaatagaaatcatt
tcaaagggagttcgcggagcattccaacattctacaacgacaacaaaggcgacaccaatt
attaatgtggaagtgcaagaggaaacacgtattgttacgcaaatgggtgaatttaaccgt
gtacttggtggtgggattgtaccaggttcacttgtgttaattggtggggatcctgggatt
gggaaatcgacattacttttacagatttctgcgcttttatcaaaccaaggaaaacgagtc
ctctatatttcaggggaggaatcagtacgccaaacaaagttacgcgcggaacgtttaggc
gtgaaatctccggagctttacatatactctgaaacgaatttagagtttttaaatcaaaca
attgaagaagttcaaccgaaatttgtgattgtcgattccattcaaactgttcatcaccca
gaagtcacaagtgcaccaggaagtgtgtcacaagtgcgtgaatgtaccgcagaattaatg
cgcattgcgaaaacgaaaaacattgcgattttcttagttggtcacgtaacaaaagaaggg
caaattgcaggtccgcgtattttagaacatatggtggataccgtgctttattttgaaggc
gagcgtcatcataatcaccgtattttaagaagtcaaaaaaaccgttttggttcaacaaat
gaaattgcgatttttgaaatgctacaaggtggattgaaagaagtattaaatccgtctgag
ctatttttacaggagcgttcacaaggggcacctggctcaacggttgtagcatccatggaa
ggaacacgtccaattctagtagaaatccaatctcttgtgacaccaaccagttttaattat
ccaaagcgtatggcaacaggagtcgatcaaaaccgtgtgcaattgttaatggctgtgctt
gaaaaacgtatgggaatgatgctacaagcgcaagatgcttatattaaagttgcaggcggt
gtgaaattagatgaacctgccattgatttagcggtgttaacgagcattgtttcaagcttt
aaagaccaggctgttcgtccgacggattgttttattggtgaggttggtttaacgggagag
gtacgccgtgtatcgcgtattgaacaacgtgtacaagaagcagcaaaattagggtttaag
cgtgcgattattcctgcgtcaaatatcggaggatgggatttccctgaaggaattcaaatc
gttggtgtcgaaacaattagtgatgctttacgatcttcatttcaagatttataa
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