Lacticaseibacillus zeae: KG087_04635
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Entry
KG087_04635 CDS
T07978
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lze
Lacticaseibacillus zeae
Pathway
lze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KG087_04635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lze03019
]
KG087_04635
Messenger RNA biogenesis [BR:
lze03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KG087_04635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
RMMBL
Ish1
Anti-Pycsar_Apyc1
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
QVI32877
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Position
complement(940770..942020)
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AA seq
416 aa
AA seq
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MTTIRFLNGLNTIGGNIVEFATKTSRVIMDFGVAADLSQETVASALEQGKLPHVPELFFN
QPDHFSDEAIFISHLHIDHMGALQYLQKDIPIYLSEPSYRLYRLLIQLGIEKPVANLHPL
AFETSLAVGDLTVTGFHSDHDEPGVMALLVDDGSRRFAHSGDVRLNGPHADRVHAWANRF
KEEKVSLLMLEGTSFSFDTPIPAEDQNHPSVPLTEMSLQTKFQQLLADSSQLVVINPYNR
NYERLAAFQASAHVNHVNGRQMVWEPNEAAILTTMTGTQPDAILGQTIQLTDIAQQPQRY
VLQNSFANLASLANLPISAYVHSNGEPLGDYDPRFAQLKDWLADHKMPLVFMNASGHAAR
EDLIELVKEVNPRVVVPWHSFHPEREADAIDAQTNADVLLPEKDLYYDFNPLTEEE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgactacgattcgctttttaaatggcttaaataccattggcggtaatattgtcgaattc
gccactaaaaccagccgggtcattatggactttggggtggcagctgatttaagtcaagaa
actgtagcctcggcccttgagcaaggaaaactgccgcatgtgccggaactctttttcaat
caacctgatcatttttccgacgaagcgatttttatctcacatctgcatattgaccacatg
ggtgctttgcagtatttgcaaaaggacatcccgatctatctttcggaaccatcctaccgc
ctctatcgactgctcattcagttaggtatcgaaaaaccggttgcaaacctgcatcccctc
gcctttgaaacctcgcttgcggttggcgatctgacggtcactgggtttcatagcgatcac
gacgagccgggtgtgatggcgttgctggttgatgacggttcgcgccgttttgcgcattca
ggcgatgtccggctcaacggcccgcatgctgatcgggttcacgcatgggccaatcgcttt
aaggaggaaaaagtgagtcttttgatgctggaaggcaccagcttttcgtttgacacgccg
attcctgctgaggatcagaatcatcccagtgtgccattgacggaaatgagcctgcagacc
aagtttcagcaattattggcggatagctctcaacttgtggtcatcaacccttacaatcgc
aattacgagcgcttagcggcgttccaagcctcggctcatgtcaatcatgtcaatggtcgg
caaatggtttgggagccaaatgaagctgccattttaacaaccatgaccggcacgcaaccc
gatgccattctcggccaaacgatccagctgactgacattgcccagcaaccgcaacgctac
gttcttcaaaacagctttgcaaatctggcctcactagcaaacttaccgatcagcgcgtac
gtccacagcaacggcgagccactgggcgactatgatccccgtttcgcccagctaaaagat
tggctagctgaccacaagatgccattagtgttcatgaacgcctcaggacacgcggctcgt
gaagatctgattgaattggtcaaggaagtcaacccccgtgtcgtcgtgccgtggcacagc
ttccatcccgaacgcgaagctgacgcgattgatgcccagacaaatgccgatgttctattg
ccggaaaaagatttgtattacgatttcaatcctttaactgaagaagaatag
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